Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.32■□□□□ 0.52
RFX5P48382 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RFX5P48382 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.32■□□□□ 0.52
RFX5P48382 AL023803.2-201ENST00000620080 638 ntBASIC18.32■□□□□ 0.52
RFX5P48382 AC068587.8-201ENST00000641239 219 ntBASIC18.32■□□□□ 0.52
RFX5P48382 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX5P48382 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX5P48382 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.32■□□□□ 0.52
RFX5P48382 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFX5P48382 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX5P48382 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX5P48382 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX5P48382 F10-203ENST00000409306 1450 ntTSL 3 BASIC18.32■□□□□ 0.52
RFX5P48382 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX5P48382 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.32■□□□□ 0.52
RFX5P48382 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX5P48382 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RFX5P48382 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.32■□□□□ 0.52
RFX5P48382 AMT-239ENST00000636865 1914 ntTSL 5 BASIC18.31■□□□□ 0.52
RFX5P48382 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX5P48382 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC18.31■□□□□ 0.52
RFX5P48382 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.31■□□□□ 0.52
RFX5P48382 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX5P48382 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.31■□□□□ 0.52
RFX5P48382 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX5P48382 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX5P48382 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.31■□□□□ 0.52
RFX5P48382 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX5P48382 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX5P48382 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RFX5P48382 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.31■□□□□ 0.52
RFX5P48382 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX5P48382 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.31■□□□□ 0.52
RFX5P48382 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC18.31■□□□□ 0.52
RFX5P48382 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC18.31■□□□□ 0.52
RFX5P48382 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.31■□□□□ 0.52
RFX5P48382 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX5P48382 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX5P48382 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.31■□□□□ 0.52
RFX5P48382 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RFX5P48382 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX5P48382 AC004899.1-201ENST00000424687 1714 ntBASIC18.31■□□□□ 0.52
RFX5P48382 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.31■□□□□ 0.52
RFX5P48382 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX5P48382 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.31■□□□□ 0.52
RFX5P48382 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RFX5P48382 MTHFR-210ENST00000641407 2387 ntBASIC18.31■□□□□ 0.52
RFX5P48382 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX5P48382 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX5P48382 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX5P48382 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX5P48382 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.3■□□□□ 0.52
RFX5P48382 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX5P48382 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX5P48382 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX5P48382 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX5P48382 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX5P48382 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
RFX5P48382 NPPA-201ENST00000376476 728 ntTSL 3 BASIC18.3■□□□□ 0.52
RFX5P48382 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX5P48382 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RFX5P48382 AC104073.2-201ENST00000453737 312 ntBASIC18.3■□□□□ 0.52
RFX5P48382 TUBB8P8-201ENST00000458717 1058 ntBASIC18.3■□□□□ 0.52
RFX5P48382 RPL18P13-201ENST00000478088 569 ntBASIC18.3■□□□□ 0.52
RFX5P48382 HIST2H2BC-201ENST00000498492 580 ntBASIC18.3■□□□□ 0.52
RFX5P48382 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX5P48382 AL139099.5-201ENST00000635274 300 ntBASIC18.3■□□□□ 0.52
RFX5P48382 MVK-217ENST00000639206 367 ntTSL 5 BASIC18.3■□□□□ 0.52
RFX5P48382 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RFX5P48382 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.3■□□□□ 0.52
RFX5P48382 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RFX5P48382 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX5P48382 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
RFX5P48382 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.3■□□□□ 0.52
RFX5P48382 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX5P48382 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.3■□□□□ 0.52
RFX5P48382 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.3■□□□□ 0.52
RFX5P48382 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
RFX5P48382 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RFX5P48382 AL354702.1-201ENST00000442006 1960 ntBASIC18.3■□□□□ 0.52
RFX5P48382 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RFX5P48382 KRT8P28-201ENST00000433288 1390 ntBASIC18.3■□□□□ 0.52
RFX5P48382 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RFX5P48382 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RFX5P48382 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX5P48382 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.29■□□□□ 0.52
RFX5P48382 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX5P48382 DBET-201ENST00000630918 3363 ntBASIC18.29■□□□□ 0.52
RFX5P48382 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX5P48382 AC006504.5-208ENST00000588784 2401 ntBASIC18.29■□□□□ 0.52
RFX5P48382 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.29■□□□□ 0.52
RFX5P48382 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RFX5P48382 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX5P48382 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.29■□□□□ 0.52
RFX5P48382 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFX5P48382 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.29■□□□□ 0.52
RFX5P48382 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX5P48382 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX5P48382 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RFX5P48382 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms