Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC18.39■□□□□ 0.53
PDE6BP35913 MIR6858-201ENST00000620733 67 ntBASIC18.39■□□□□ 0.53
PDE6BP35913 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PDE6BP35913 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PDE6BP35913 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.39■□□□□ 0.53
PDE6BP35913 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PDE6BP35913 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PDE6BP35913 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6BP35913 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6BP35913 PCDH8P1-201ENST00000428983 2773 ntBASIC18.38■□□□□ 0.53
PDE6BP35913 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6BP35913 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6BP35913 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6BP35913 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PDE6BP35913 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.38■□□□□ 0.53
PDE6BP35913 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.38■□□□□ 0.53
PDE6BP35913 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6BP35913 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6BP35913 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PDE6BP35913 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6BP35913 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC18.38■□□□□ 0.53
PDE6BP35913 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC18.38■□□□□ 0.53
PDE6BP35913 XBP1P1-201ENST00000436573 652 ntBASIC18.38■□□□□ 0.53
PDE6BP35913 DUTP3-201ENST00000450025 415 ntBASIC18.38■□□□□ 0.53
PDE6BP35913 RPL18AP3-201ENST00000462885 528 ntBASIC18.38■□□□□ 0.53
PDE6BP35913 NDUFS6P1-201ENST00000485187 316 ntBASIC18.38■□□□□ 0.53
PDE6BP35913 AL157792.1-201ENST00000488281 530 ntBASIC18.38■□□□□ 0.53
PDE6BP35913 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.38■□□□□ 0.53
PDE6BP35913 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6BP35913 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC18.38■□□□□ 0.53
PDE6BP35913 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PDE6BP35913 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.38■□□□□ 0.53
PDE6BP35913 AC092299.1-201ENST00000632679 757 ntBASIC18.38■□□□□ 0.53
PDE6BP35913 ZBED1P1-201ENST00000502364 1930 ntBASIC18.38■□□□□ 0.53
PDE6BP35913 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.38■□□□□ 0.53
PDE6BP35913 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.38■□□□□ 0.53
PDE6BP35913 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6BP35913 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PDE6BP35913 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6BP35913 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6BP35913 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6BP35913 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6BP35913 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6BP35913 SALL4P5-201ENST00000419001 1760 ntBASIC18.37■□□□□ 0.53
PDE6BP35913 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PDE6BP35913 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.37■□□□□ 0.53
PDE6BP35913 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.37■□□□□ 0.53
PDE6BP35913 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.37■□□□□ 0.53
PDE6BP35913 AC010491.1-201ENST00000563101 2797 ntBASIC18.37■□□□□ 0.53
PDE6BP35913 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.37■□□□□ 0.53
PDE6BP35913 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.37■□□□□ 0.53
PDE6BP35913 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.37■□□□□ 0.53
PDE6BP35913 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6BP35913 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6BP35913 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.37■□□□□ 0.53
PDE6BP35913 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6BP35913 Z69890.1-201ENST00000382990 339 ntBASIC18.37■□□□□ 0.53
PDE6BP35913 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6BP35913 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.37■□□□□ 0.53
PDE6BP35913 RPSAP15-201ENST00000448168 861 ntBASIC18.37■□□□□ 0.53
PDE6BP35913 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC18.37■□□□□ 0.53
PDE6BP35913 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PDE6BP35913 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.37■□□□□ 0.53
PDE6BP35913 MIR4522-201ENST00000584932 87 ntBASIC18.37■□□□□ 0.53
PDE6BP35913 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.37■□□□□ 0.53
PDE6BP35913 AL132780.4-201ENST00000624870 1135 ntBASIC18.37■□□□□ 0.53
PDE6BP35913 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PDE6BP35913 LILRP1-201ENST00000444199 1370 ntBASIC18.37■□□□□ 0.53
PDE6BP35913 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6BP35913 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6BP35913 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6BP35913 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC18.37■□□□□ 0.53
PDE6BP35913 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6BP35913 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.37■□□□□ 0.53
PDE6BP35913 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6BP35913 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PDE6BP35913 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6BP35913 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6BP35913 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6BP35913 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.36■□□□□ 0.53
PDE6BP35913 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6BP35913 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6BP35913 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6BP35913 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6BP35913 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PDE6BP35913 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6BP35913 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
PDE6BP35913 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6BP35913 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6BP35913 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6BP35913 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6BP35913 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PDE6BP35913 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms