Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.76□□□□□ -0.05
EPHA3P29320 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.76□□□□□ -0.05
EPHA3P29320 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
EPHA3P29320 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
EPHA3P29320 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
EPHA3P29320 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.76□□□□□ -0.05
EPHA3P29320 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.76□□□□□ -0.05
EPHA3P29320 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
EPHA3P29320 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.76□□□□□ -0.05
EPHA3P29320 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.76□□□□□ -0.05
EPHA3P29320 AC007326.2-201ENST00000624224 7579 ntBASIC14.76□□□□□ -0.05
EPHA3P29320 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
EPHA3P29320 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
EPHA3P29320 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.76□□□□□ -0.05
EPHA3P29320 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.76□□□□□ -0.05
EPHA3P29320 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
EPHA3P29320 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.75□□□□□ -0.05
EPHA3P29320 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
EPHA3P29320 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 AC018665.1-201ENST00000622927 1362 ntBASIC14.75□□□□□ -0.05
EPHA3P29320 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
EPHA3P29320 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.75□□□□□ -0.05
EPHA3P29320 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
EPHA3P29320 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.75□□□□□ -0.05
EPHA3P29320 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.75□□□□□ -0.05
EPHA3P29320 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.75□□□□□ -0.05
EPHA3P29320 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.75□□□□□ -0.05
EPHA3P29320 RPL37AP1-201ENST00000412502 279 ntBASIC14.75□□□□□ -0.05
EPHA3P29320 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.75□□□□□ -0.05
EPHA3P29320 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.75□□□□□ -0.05
EPHA3P29320 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.75□□□□□ -0.05
EPHA3P29320 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
EPHA3P29320 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 MIR4469-201ENST00000583919 79 ntBASIC14.75□□□□□ -0.05
EPHA3P29320 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.75□□□□□ -0.05
EPHA3P29320 AL121894.2-201ENST00000602977 491 ntBASIC14.75□□□□□ -0.05
EPHA3P29320 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.75□□□□□ -0.05
EPHA3P29320 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.75□□□□□ -0.05
EPHA3P29320 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.75□□□□□ -0.05
EPHA3P29320 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
EPHA3P29320 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.75□□□□□ -0.05
EPHA3P29320 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
EPHA3P29320 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.75□□□□□ -0.05
EPHA3P29320 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
EPHA3P29320 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
EPHA3P29320 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 AL359881.3-201ENST00000602640 1721 ntBASIC14.75□□□□□ -0.05
EPHA3P29320 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
EPHA3P29320 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA3P29320 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.75□□□□□ -0.05
EPHA3P29320 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.74□□□□□ -0.05
EPHA3P29320 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.74□□□□□ -0.05
EPHA3P29320 AC023090.2-201ENST00000625182 2110 ntBASIC14.74□□□□□ -0.05
EPHA3P29320 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.74□□□□□ -0.05
EPHA3P29320 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.74□□□□□ -0.05
EPHA3P29320 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.74□□□□□ -0.05
EPHA3P29320 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
EPHA3P29320 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.74□□□□□ -0.05
EPHA3P29320 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms