Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 NDUFAF5-214ENST00000485738 718 ntTSL 517.55■□□□□ 0.43e-7■■□□□ 13.6
U2AF2P26368 NDUFAF5-206ENST00000475968 933 ntTSL 514.66□□□□□ -0.063e-7■■□□□ 13.6
U2AF2P26368 NDUFAF5-213ENST00000481249 676 ntTSL 514.66□□□□□ -0.063e-7■■□□□ 13.6
U2AF2P26368 NDUFAF5-209ENST00000476536 763 ntTSL 55.03□□□□□ -1.63e-7■■□□□ 13.6
U2AF2P26368 NDUFAF5-205ENST00000469177 326 ntTSL 31.22□□□□□ -2.213e-7■■□□□ 13.6
U2AF2P26368 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.389e-8■■□□□ 13.6
U2AF2P26368 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC9.83□□□□□ -0.841e-7■■□□□ 13.6
U2AF2P26368 HPS4-214ENST00000485842 973 ntTSL 313.39□□□□□ -0.271e-6■■□□□ 13.6
U2AF2P26368 HPS4-202ENST00000398145 4497 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.361e-6■■□□□ 13.6
U2AF2P26368 HPS4-217ENST00000496385 2772 ntTSL 211□□□□□ -0.651e-6■■□□□ 13.6
U2AF2P26368 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC10.96□□□□□ -0.661e-6■■□□□ 13.6
U2AF2P26368 HPS4-208ENST00000464362 4277 ntTSL 510.48□□□□□ -0.731e-6■■□□□ 13.6
U2AF2P26368 HPS4-204ENST00000422379 1942 ntTSL 510.31□□□□□ -0.761e-6■■□□□ 13.6
U2AF2P26368 HPS4-206ENST00000439453 3936 ntTSL 1 (best)10.23□□□□□ -0.771e-6■■□□□ 13.6
U2AF2P26368 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.881e-6■■□□□ 13.6
U2AF2P26368 HPS4-209ENST00000466781 6136 ntTSL 1 (best)9.48□□□□□ -0.891e-6■■□□□ 13.6
U2AF2P26368 HPS4-205ENST00000429411 3492 ntTSL 29.4□□□□□ -0.91e-6■■□□□ 13.6
U2AF2P26368 ZNF638-225ENST00000494241 703 ntTSL 31.95□□□□□ -2.15e-7■■□□□ 13.6
U2AF2P26368 AC005614.2-201ENST00000595508 461 ntTSL 5 BASIC10.23□□□□□ -0.773e-7■■□□□ 13.6
U2AF2P26368 ZNF780A-202ENST00000414720 2396 ntTSL 2 BASIC9.46□□□□□ -0.93e-7■■□□□ 13.6
U2AF2P26368 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.43□□□□□ -1.223e-7■■□□□ 13.6
U2AF2P26368 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.182e-9■■□□□ 13.6
U2AF2P26368 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.192e-9■■□□□ 13.6
U2AF2P26368 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.212e-9■■□□□ 13.6
U2AF2P26368 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.352e-9■■□□□ 13.6
U2AF2P26368 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.87e-7■■□□□ 13.6
U2AF2P26368 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.837e-7■■□□□ 13.6
U2AF2P26368 FREM1-201ENST00000380875 6126 ntTSL 1 (best)9.87□□□□□ -0.837e-7■■□□□ 13.6
U2AF2P26368 INTS8-220ENST00000524333 3272 ntTSL 219.77■□□□□ 0.761e-6■■□□□ 13.6
U2AF2P26368 INTS8-214ENST00000523206 3351 ntTSL 1 (best)19.27■□□□□ 0.681e-6■■□□□ 13.6
U2AF2P26368 INTS8-201ENST00000343161 3434 ntTSL 1 (best)19.19■□□□□ 0.661e-6■■□□□ 13.6
U2AF2P26368 INTS8-217ENST00000523731 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.111e-6■■□□□ 13.6
U2AF2P26368 INTS8-207ENST00000520526 2482 ntTSL 1 (best)5.55□□□□□ -1.521e-6■■□□□ 13.6
U2AF2P26368 DAP3-202ENST00000368336 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.23e-6■■□□□ 13.6
U2AF2P26368 DAP3-225ENST00000535183 1894 ntTSL 2 BASIC13.77□□□□□ -0.213e-6■■□□□ 13.6
U2AF2P26368 GNPAT-202ENST00000416000 1924 ntAPPRIS ALT2 TSL 518.74■□□□□ 0.592e-6■■□□□ 13.6
U2AF2P26368 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.012e-6■■□□□ 13.6
U2AF2P26368 METTL3-208ENST00000539760 1462 ntTSL 210.64□□□□□ -0.715e-7■■□□□ 13.6
U2AF2P26368 METTL3-212ENST00000544500 1789 ntTSL 29.78□□□□□ -0.845e-7■■□□□ 13.6
U2AF2P26368 ADAM17-201ENST00000310823 4349 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.434e-6■■□□□ 13.6
U2AF2P26368 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.06■□□□□ 0.81e-8■■□□□ 13.6
U2AF2P26368 TIA1-219ENST00000496452 853 ntTSL 217.95■□□□□ 0.463e-7■■□□□ 13.6
U2AF2P26368 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.273e-8■■□□□ 13.6
U2AF2P26368 PUM2-211ENST00000446940 525 ntTSL 416.49■□□□□ 0.233e-8■■□□□ 13.6
U2AF2P26368 PUM2-206ENST00000424110 546 ntTSL 415.39■□□□□ 0.053e-8■■□□□ 13.6
U2AF2P26368 LRIF1-201ENST00000369763 3475 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.353e-8■■□□□ 13.6
U2AF2P26368 PUM2-210ENST00000442400 955 ntTSL 59.77□□□□□ -0.853e-8■■□□□ 13.6
U2AF2P26368 PUM2-207ENST00000429419 547 ntTSL 55.58□□□□□ -1.523e-8■■□□□ 13.6
U2AF2P26368 PUM2-205ENST00000420234 562 ntTSL 55.26□□□□□ -1.573e-8■■□□□ 13.6
U2AF2P26368 PUM2-208ENST00000432105 584 ntTSL 54.57□□□□□ -1.683e-8■■□□□ 13.6
U2AF2P26368 RAPGEF6-203ENST00000503398 149 ntTSL 5-0.59□□□□□ -2.53e-8■■□□□ 13.6
U2AF2P26368 COPA-202ENST00000368069 4664 ntTSL 1 (best) BASIC13.28□□□□□ -0.286e-7■■□□□ 13.6
U2AF2P26368 COPA-201ENST00000241704 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.346e-7■■□□□ 13.6
U2AF2P26368 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC8.19□□□□□ -1.13e-12■■□□□ 13.6
U2AF2P26368 TASP1-206ENST00000480436 2302 ntTSL 517.49■□□□□ 0.393e-7■■□□□ 13.6
U2AF2P26368 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.233e-7■■□□□ 13.6
U2AF2P26368 TASP1-204ENST00000465381 993 ntTSL 515.19■□□□□ 0.023e-7■■□□□ 13.6
U2AF2P26368 SDR39U1-205ENST00000553546 648 ntTSL 216.74■□□□□ 0.274e-9■■□□□ 13.6
U2AF2P26368 SDR39U1-213ENST00000555561 452 ntTSL 313.4□□□□□ -0.264e-9■■□□□ 13.6
U2AF2P26368 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.251e-6■■□□□ 13.6
U2AF2P26368 TBCK-215ENST00000509532 848 ntTSL 513.25□□□□□ -0.294e-8■■□□□ 13.6
U2AF2P26368 TBCK-210ENST00000506280 532 ntTSL 52.98□□□□□ -1.934e-8■■□□□ 13.6
U2AF2P26368 CTNND1-228ENST00000531007 848 ntTSL 411.36□□□□□ -0.592e-6■■□□□ 13.6
U2AF2P26368 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.081e-6■■□□□ 13.6
U2AF2P26368 FBXO9-203ENST00000370939 1580 ntTSL 1 (best) BASIC9.21□□□□□ -0.931e-6■■□□□ 13.6
U2AF2P26368 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7□□□□□ -1.291e-6■■□□□ 13.6
U2AF2P26368 AGFG1-206ENST00000456594 1065 ntTSL 53.87□□□□□ -1.791e-7■■□□□ 13.6
U2AF2P26368 GCLC-206ENST00000509541 3774 ntTSL 510.27□□□□□ -0.771e-6■■□□□ 13.6
U2AF2P26368 PRRC2A-208ENST00000469577 918 ntTSL 516.03■□□□□ 0.168e-9■■□□□ 13.6
U2AF2P26368 PCID2-213ENST00000484641 800 ntTSL 510.09□□□□□ -0.792e-6■■□□□ 13.6
U2AF2P26368 PCID2-211ENST00000475433 776 ntTSL 55.71□□□□□ -1.52e-6■■□□□ 13.6
U2AF2P26368 PCID2-212ENST00000480971 701 ntTSL 53.42□□□□□ -1.862e-6■■□□□ 13.6
U2AF2P26368 FGL1-206ENST00000518650 1093 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.213e-7■■□□□ 13.6
U2AF2P26368 ITPR2-201ENST00000242737 581 ntTSL 1 (best) BASIC12.58□□□□□ -0.41e-6■■□□□ 13.6
U2AF2P26368 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.14■□□□□ 0.652e-8■■□□□ 13.6
U2AF2P26368 ZNF445-203ENST00000460529 1312 ntTSL 1 (best)17.42■□□□□ 0.382e-8■■□□□ 13.6
U2AF2P26368 COX11-204ENST00000572558 1054 ntTSL 316.61■□□□□ 0.253e-6■■□□□ 13.6
U2AF2P26368 COX11-209ENST00000576370 2663 ntTSL 1 (best)13.15□□□□□ -0.33e-6■■□□□ 13.6
U2AF2P26368 COX11-203ENST00000572088 3244 nt7.73□□□□□ -1.173e-6■■□□□ 13.6
U2AF2P26368 COX11-206ENST00000574821 495 ntTSL 22.92□□□□□ -1.943e-6■■□□□ 13.6
U2AF2P26368 COX11-205ENST00000573912 453 ntTSL 22.68□□□□□ -1.983e-6■■□□□ 13.6
U2AF2P26368 COX11-208ENST00000576084 652 ntTSL 32.52□□□□□ -2.013e-6■■□□□ 13.6
U2AF2P26368 GATS-204ENST00000435519 1306 ntTSL 232.37■■■□□ 2.771e-7■■□□□ 13.6
U2AF2P26368 GATS-202ENST00000414739 2007 ntTSL 1 (best)28.89■■■□□ 2.221e-7■■□□□ 13.6
U2AF2P26368 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.051e-7■■□□□ 13.6
U2AF2P26368 GATS-211ENST00000543273 2840 ntTSL 1 (best)27.02■■□□□ 1.921e-7■■□□□ 13.6
U2AF2P26368 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.71■■□□□ 1.231e-7■■□□□ 13.6
U2AF2P26368 GATS-201ENST00000328453 3526 ntTSL 1 (best)21.09■□□□□ 0.971e-7■■□□□ 13.6
U2AF2P26368 GATS-207ENST00000440058 554 ntTSL 211.96□□□□□ -0.491e-7■■□□□ 13.6
U2AF2P26368 GATS-206ENST00000437485 443 ntTSL 511.95□□□□□ -0.51e-7■■□□□ 13.6
U2AF2P26368 GATS-208ENST00000445230 451 ntTSL 38.73□□□□□ -1.011e-7■■□□□ 13.6
U2AF2P26368 AMD1-202ENST00000368877 1605 ntTSL 2 BASIC10.24□□□□□ -0.775e-8■■□□□ 13.6
U2AF2P26368 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC9.18□□□□□ -0.945e-8■■□□□ 13.6
U2AF2P26368 AMD1-207ENST00000612642 4745 ntTSL 1 (best)8.02□□□□□ -1.135e-8■■□□□ 13.6
U2AF2P26368 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC8.01□□□□□ -1.135e-8■■□□□ 13.6
U2AF2P26368 AMD1-205ENST00000451850 3121 ntTSL 1 (best)7.43□□□□□ -1.225e-8■■□□□ 13.6
U2AF2P26368 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.455e-8■■□□□ 13.6
U2AF2P26368 PPP1R3E-209ENST00000561437 690 ntTSL 219.58■□□□□ 0.727e-15■■□□□ 13.6
U2AF2P26368 PPP1R3E-206ENST00000560913 932 ntTSL 219.02■□□□□ 0.647e-15■■□□□ 13.6
U2AF2P26368 PPP1R3E-207ENST00000561178 1594 ntTSL 217.28■□□□□ 0.367e-15■■□□□ 13.6
Retrieved 100 of 36,523 protein–RNA pairs in 229.7 ms