RNA–Protein interactions for RNA: ENST00000612642.4

AMD1-207, Transcript of adenosylmethionine decarboxylase 1, humanhuman

TSL 1 (best)

Gene AMD1, Length 4,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMD1-207ENST00000612642 NISCHQ9Y2I1 1504 aa13.31□□□□□ -0.28
AMD1-207ENST00000612642 DCAF8L2P0C7V8 631 aa12.42□□□□□ -0.42
AMD1-207ENST00000612642 SUPT5HO00267 1087 aaKnown RBP12.02□□□□□ -0.49
AMD1-207ENST00000612642 SHROOM4Q9ULL8 1493 aa11.91□□□□□ -0.5
AMD1-207ENST00000612642 APLP2Q06481 763 aa11.38□□□□□ -0.59
AMD1-207ENST00000612642 ZEB1P37275 1124 aaPredicted RBP11.35□□□□□ -0.59
AMD1-207ENST00000612642 TRIM41Q8WV44 630 aa11.34□□□□□ -0.59
AMD1-207ENST00000612642 CCDC180Q9P1Z9 1646 aa11.23□□□□□ -0.61
AMD1-207ENST00000612642 FAM9AQ8IZU1 332 aaPredicted RBP11.21□□□□□ -0.61
AMD1-207ENST00000612642 PELP1Q8IZL8 1130 aaKnown RBP11.2□□□□□ -0.62
AMD1-207ENST00000612642 PCGF6Q9BYE7 350 aa11.19□□□□□ -0.62
AMD1-207ENST00000612642 EHMT2Q96KQ7 1210 aa11.14□□□□□ -0.63
AMD1-207ENST00000612642 ZCCHC6Q5VYS8 1495 aaKnown RBP11.13□□□□□ -0.63
AMD1-207ENST00000612642 CHIC1Q5VXU3 224 aa11.12□□□□□ -0.63
AMD1-207ENST00000612642 TRIM26Q12899 539 aaPredicted RBP11.07□□□□□ -0.64
AMD1-207ENST00000612642 UBTFP17480 764 aaKnown RBP11.04□□□□□ -0.64
AMD1-207ENST00000612642 CCER1Q8TC90 406 aaPredicted RBP10.99□□□□□ -0.65
AMD1-207ENST00000612642 CENPBP07199 599 aaPredicted RBP10.99□□□□□ -0.65
AMD1-207ENST00000612642 ABCC9O60706 1549 aa10.93□□□□□ -0.66
AMD1-207ENST00000612642 HRCP23327 699 aa10.93□□□□□ -0.66
AMD1-207ENST00000612642 DCAF1Q9Y4B6 1507 aa10.84□□□□□ -0.67
AMD1-207ENST00000612642 TTBK1Q5TCY1 1321 aaPredicted RBP10.82□□□□□ -0.68
AMD1-207ENST00000612642 LOC105371045A0A1W2PR82 267 aa10.79□□□□□ -0.68
AMD1-207ENST00000612642 RANGAP1P46060 587 aaPredicted RBP10.77□□□□□ -0.69
AMD1-207ENST00000612642 ATP1B4Q9UN42 357 aaPredicted RBP10.75□□□□□ -0.69
AMD1-207ENST00000612642 NACADO15069 1562 aa10.73□□□□□ -0.69
AMD1-207ENST00000612642 SCRIBQ14160 1630 aa10.73□□□□□ -0.69
AMD1-207ENST00000612642 RB1CC1Q8TDY2 1594 aa10.69□□□□□ -0.7
AMD1-207ENST00000612642 PABPN1Q86U42 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
AMD1-207ENST00000612642 MYT1Q01538 1121 aa10.62□□□□□ -0.71
AMD1-207ENST00000612642 NEFLP07196 543 aa10.62□□□□□ -0.71
AMD1-207ENST00000612642 CSRNP3Q8WYN3 585 aa10.6□□□□□ -0.71
AMD1-207ENST00000612642 PPARGC1BQ86YN6 1023 aaKnown RBP10.59□□□□□ -0.71
AMD1-207ENST00000612642 MYO15BQ96JP2 1530 aa10.58□□□□□ -0.72
AMD1-207ENST00000612642 EEA1Q15075 1411 aa10.56□□□□□ -0.72
AMD1-207ENST00000612642 RSF1Q96T23 1441 aaPredicted RBP10.55□□□□□ -0.72
AMD1-207ENST00000612642 HNRNPUL2Q1KMD3 747 aaKnown RBP10.54□□□□□ -0.72
AMD1-207ENST00000612642 ERICH6Q7L0X2 663 aa10.48□□□□□ -0.73
AMD1-207ENST00000612642 BAZ1AQ9NRL2 1556 aaPredicted RBP10.47□□□□□ -0.73
AMD1-207ENST00000612642 DIEXFQ68CQ4 756 aaKnown RBP10.46□□□□□ -0.73
AMD1-207ENST00000612642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.45□□□□□ -0.74
AMD1-207ENST00000612642 ITGAEP38570 1179 aa10.45□□□□□ -0.74
AMD1-207ENST00000612642 YTHDC1Q96MU7 727 aaKnown RBP10.44□□□□□ -0.74
AMD1-207ENST00000612642 FAM50AQ14320 339 aaKnown RBP10.39□□□□□ -0.75
AMD1-207ENST00000612642 ZNF316A6NFI3 1004 aaPredicted RBP10.37□□□□□ -0.75
AMD1-207ENST00000612642 GOLGA3Q08378 1498 aa10.36□□□□□ -0.75
AMD1-207ENST00000612642 BAZ1BQ9UIG0 1483 aaKnown RBP10.33□□□□□ -0.76
AMD1-207ENST00000612642 CLSPNQ9HAW4 1339 aa10.33□□□□□ -0.76
AMD1-207ENST00000612642 ACIN1Q9UKV3 1341 aaKnown RBP10.32□□□□□ -0.76
AMD1-207ENST00000612642 WRNQ14191 1432 aaPredicted RBP eCLIP10.32□□□□□ -0.76
AMD1-207ENST00000612642 TNIKQ9UKE5 1360 aa10.32□□□□□ -0.76
AMD1-207ENST00000612642 CDK11AQ9UQ88 783 aaPredicted RBP10.31□□□□□ -0.76
AMD1-207ENST00000612642 CEP164Q9UPV0 1460 aa10.3□□□□□ -0.76
AMD1-207ENST00000612642 CLIP1P30622 1438 aa10.29□□□□□ -0.76
AMD1-207ENST00000612642 TRIM52Q96A61 297 aa10.28□□□□□ -0.76
AMD1-207ENST00000612642 CEP162Q5TB80 1403 aa10.26□□□□□ -0.77
AMD1-207ENST00000612642 ANP32CO43423 234 aa10.25□□□□□ -0.77
AMD1-207ENST00000612642 MYT1LQ9UL68 1186 aa10.25□□□□□ -0.77
AMD1-207ENST00000612642 KIF27Q86VH2 1401 aa10.24□□□□□ -0.77
AMD1-207ENST00000612642 SMARCA2P51531 1590 aa10.23□□□□□ -0.77
AMD1-207ENST00000612642 CECR2Q9BXF3 1484 aa10.23□□□□□ -0.77
AMD1-207ENST00000612642 TOP2AP11388 1531 aaKnown RBP10.2□□□□□ -0.78
AMD1-207ENST00000612642 NEUROD1Q13562 356 aa10.2□□□□□ -0.78
AMD1-207ENST00000612642 MROH2BQ7Z745 1585 aa10.2□□□□□ -0.78
AMD1-207ENST00000612642 POLR3GLQ9BT43 218 aa10.18□□□□□ -0.78
AMD1-207ENST00000612642 TONSLQ96HA7 1378 aa10.15□□□□□ -0.79
AMD1-207ENST00000612642 DAXXQ9UER7 740 aaPredicted RBP10.14□□□□□ -0.79
AMD1-207ENST00000612642 CCDC88BA6NC98 1476 aa10.14□□□□□ -0.79
AMD1-207ENST00000612642 P3H3Q8IVL6 736 aa10.14□□□□□ -0.79
AMD1-207ENST00000612642 MTUS2Q5JR59 1369 aa10.12□□□□□ -0.79
AMD1-207ENST00000612642 GTF3C3Q9Y5Q9 886 aa10.11□□□□□ -0.79
AMD1-207ENST00000612642 FBLN2P98095 1184 aa10.11□□□□□ -0.79
AMD1-207ENST00000612642 FHAD1B1AJZ9 1412 aa10.1□□□□□ -0.79
AMD1-207ENST00000612642 SMARCA4P51532 1647 aa10.07□□□□□ -0.8
AMD1-207ENST00000612642 VPS8Q8N3P4 1428 aa10.05□□□□□ -0.8
AMD1-207ENST00000612642 WIZO95785 1651 aa10.04□□□□□ -0.8
AMD1-207ENST00000612642 TIMELESSQ9UNS1 1208 aa10.03□□□□□ -0.8
AMD1-207ENST00000612642 SOGA1O94964 1423 aa10.01□□□□□ -0.81
AMD1-207ENST00000612642 CARMIL1Q5VZK9 1371 aa10□□□□□ -0.81
AMD1-207ENST00000612642 ZNF326Q5BKZ1 582 aaKnown RBP9.99□□□□□ -0.81
AMD1-207ENST00000612642 ATAD2BQ9ULI0 1458 aa9.99□□□□□ -0.81
AMD1-207ENST00000612642 ZNF777Q9ULD5 760 aaPredicted RBP9.99□□□□□ -0.81
AMD1-207ENST00000612642 TSPY4P0CV99 314 aa9.99□□□□□ -0.81
AMD1-207ENST00000612642 TSPY10P0CW01 314 aa9.99□□□□□ -0.81
AMD1-207ENST00000612642 CUX2O14529 1486 aa9.99□□□□□ -0.81
AMD1-207ENST00000612642 CHMP7Q8WUX9 453 aaPredicted RBP9.98□□□□□ -0.81
AMD1-207ENST00000612642 CCNB3Q8WWL7 1395 aa9.97□□□□□ -0.81
AMD1-207ENST00000612642 RTL5Q5HYW3 569 aaPredicted RBP9.97□□□□□ -0.81
AMD1-207ENST00000612642 ABCC8Q09428 1581 aa9.97□□□□□ -0.81
AMD1-207ENST00000612642 SLC4A1APQ9BWU0 796 aaKnown RBP9.96□□□□□ -0.82
AMD1-207ENST00000612642 PDS5BQ9NTI5 1447 aa9.96□□□□□ -0.82
AMD1-207ENST00000612642 NPM1P06748 294 aaKnown RBP eCLIP9.93□□□□□ -0.82
AMD1-207ENST00000612642 PLEKHD1A6NEE1 506 aa9.92□□□□□ -0.82
AMD1-207ENST00000612642 EIF4G2P78344 907 aaKnown RBP eCLIP9.92□□□□□ -0.82
AMD1-207ENST00000612642 CADPSQ9ULU8 1353 aa9.92□□□□□ -0.82
AMD1-207ENST00000612642 FMN1Q68DA7 1419 aa9.92□□□□□ -0.82
AMD1-207ENST00000612642 CNGB1Q14028 1251 aaPredicted RBP9.92□□□□□ -0.82
AMD1-207ENST00000612642 ARID3CA6NKF2 412 aa9.91□□□□□ -0.82
AMD1-207ENST00000612642 NEFMP07197 916 aa9.91□□□□□ -0.82
AMD1-207ENST00000612642 DDX10Q13206 875 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms