Protein–RNA interactions for Protein: P24046

GABRR1, Gamma-aminobutyric acid receptor subunit rho-1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR1P24046 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.09□□□□□ -0.31
GABRR1P24046 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
GABRR1P24046 AL133267.1-201ENST00000398220 340 ntBASIC13.09□□□□□ -0.31
GABRR1P24046 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
GABRR1P24046 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.09□□□□□ -0.31
GABRR1P24046 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GABRR1P24046 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.09□□□□□ -0.31
GABRR1P24046 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.09□□□□□ -0.31
GABRR1P24046 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GABRR1P24046 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.09□□□□□ -0.31
GABRR1P24046 AC097493.3-201ENST00000509725 367 ntBASIC13.09□□□□□ -0.31
GABRR1P24046 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.09□□□□□ -0.31
GABRR1P24046 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
GABRR1P24046 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.09□□□□□ -0.31
GABRR1P24046 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
GABRR1P24046 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
GABRR1P24046 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GABRR1P24046 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.09□□□□□ -0.31
GABRR1P24046 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.09□□□□□ -0.31
GABRR1P24046 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.09□□□□□ -0.31
GABRR1P24046 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.09□□□□□ -0.31
GABRR1P24046 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.09□□□□□ -0.31
GABRR1P24046 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
GABRR1P24046 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GABRR1P24046 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GABRR1P24046 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.09□□□□□ -0.31
GABRR1P24046 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.09□□□□□ -0.31
GABRR1P24046 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GABRR1P24046 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GABRR1P24046 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
GABRR1P24046 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
GABRR1P24046 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GABRR1P24046 AC087499.5-201ENST00000452760 1342 ntBASIC13.09□□□□□ -0.31
GABRR1P24046 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GABRR1P24046 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GABRR1P24046 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GABRR1P24046 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GABRR1P24046 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
GABRR1P24046 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
GABRR1P24046 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.08□□□□□ -0.31
GABRR1P24046 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
GABRR1P24046 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
GABRR1P24046 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
GABRR1P24046 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
GABRR1P24046 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
GABRR1P24046 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.08□□□□□ -0.32
GABRR1P24046 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
GABRR1P24046 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
GABRR1P24046 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.08□□□□□ -0.32
GABRR1P24046 AC100757.3-201ENST00000622361 1406 ntBASIC13.08□□□□□ -0.32
GABRR1P24046 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
GABRR1P24046 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.08□□□□□ -0.32
GABRR1P24046 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.08□□□□□ -0.32
GABRR1P24046 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.08□□□□□ -0.32
GABRR1P24046 AC015922.1-201ENST00000421102 1152 ntBASIC13.08□□□□□ -0.32
GABRR1P24046 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
GABRR1P24046 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.08□□□□□ -0.32
GABRR1P24046 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.08□□□□□ -0.32
GABRR1P24046 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.08□□□□□ -0.32
GABRR1P24046 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.08□□□□□ -0.32
GABRR1P24046 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 TIMM17BP1-201ENST00000545713 516 ntBASIC13.08□□□□□ -0.32
GABRR1P24046 DUX4L27-201ENST00000554796 1261 ntBASIC13.08□□□□□ -0.32
GABRR1P24046 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.08□□□□□ -0.32
GABRR1P24046 LINC01115-203ENST00000606068 577 ntBASIC13.08□□□□□ -0.32
GABRR1P24046 AC025181.2-201ENST00000606994 802 ntBASIC13.08□□□□□ -0.32
GABRR1P24046 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.08□□□□□ -0.32
GABRR1P24046 AC106028.4-201ENST00000614509 607 ntBASIC13.08□□□□□ -0.32
GABRR1P24046 AL390754.1-201ENST00000619088 582 ntBASIC13.08□□□□□ -0.32
GABRR1P24046 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.08□□□□□ -0.32
GABRR1P24046 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.08□□□□□ -0.32
GABRR1P24046 AF228730.6-201ENST00000641497 218 ntBASIC13.08□□□□□ -0.32
GABRR1P24046 AC084121.3-201ENST00000641716 218 ntBASIC13.08□□□□□ -0.32
GABRR1P24046 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
GABRR1P24046 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.08□□□□□ -0.32
GABRR1P24046 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
GABRR1P24046 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.08□□□□□ -0.32
GABRR1P24046 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.08□□□□□ -0.32
GABRR1P24046 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
GABRR1P24046 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
GABRR1P24046 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.08□□□□□ -0.32
GABRR1P24046 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GABRR1P24046 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms