Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AP001282.1-201ENST00000531301 1499 ntBASIC14.17□□□□□ -0.14
NR4A1P22736 AC113367.3-201ENST00000508316 1912 ntBASIC14.17□□□□□ -0.14
NR4A1P22736 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NR4A1P22736 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A1P22736 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NR4A1P22736 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NR4A1P22736 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
NR4A1P22736 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NR4A1P22736 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.16□□□□□ -0.14
NR4A1P22736 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.16□□□□□ -0.14
NR4A1P22736 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NR4A1P22736 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.16□□□□□ -0.14
NR4A1P22736 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
NR4A1P22736 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.16□□□□□ -0.14
NR4A1P22736 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
NR4A1P22736 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.16□□□□□ -0.14
NR4A1P22736 AC093724.1-201ENST00000448659 1027 ntBASIC14.16□□□□□ -0.14
NR4A1P22736 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.16□□□□□ -0.14
NR4A1P22736 AC098859.1-201ENST00000502915 1238 ntBASIC14.16□□□□□ -0.14
NR4A1P22736 AC109322.1-201ENST00000524499 1264 ntBASIC14.16□□□□□ -0.14
NR4A1P22736 ALG1L8P-201ENST00000533887 760 ntBASIC14.16□□□□□ -0.14
NR4A1P22736 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NR4A1P22736 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.16□□□□□ -0.14
NR4A1P22736 AL512356.2-201ENST00000546955 174 ntBASIC14.16□□□□□ -0.14
NR4A1P22736 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NR4A1P22736 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.16□□□□□ -0.14
NR4A1P22736 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.16□□□□□ -0.14
NR4A1P22736 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.16□□□□□ -0.14
NR4A1P22736 SPTSSB-204ENST00000617024 1292 ntBASIC14.16□□□□□ -0.14
NR4A1P22736 AP001059.3-201ENST00000619053 235 ntBASIC14.16□□□□□ -0.14
NR4A1P22736 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.16□□□□□ -0.14
NR4A1P22736 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NR4A1P22736 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
NR4A1P22736 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.16□□□□□ -0.14
NR4A1P22736 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NR4A1P22736 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NR4A1P22736 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
NR4A1P22736 AC105206.1-202ENST00000314927 2368 ntBASIC14.16□□□□□ -0.14
NR4A1P22736 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A1P22736 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.15□□□□□ -0.14
NR4A1P22736 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR4A1P22736 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
NR4A1P22736 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
NR4A1P22736 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.15□□□□□ -0.14
NR4A1P22736 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NR4A1P22736 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR4A1P22736 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NR4A1P22736 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.15□□□□□ -0.14
NR4A1P22736 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NR4A1P22736 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR4A1P22736 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NR4A1P22736 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
NR4A1P22736 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.15□□□□□ -0.14
NR4A1P22736 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR4A1P22736 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NR4A1P22736 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR4A1P22736 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.15□□□□□ -0.14
NR4A1P22736 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.15□□□□□ -0.14
NR4A1P22736 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NR4A1P22736 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR4A1P22736 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR4A1P22736 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NR4A1P22736 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NR4A1P22736 FAM8A3P-201ENST00000427218 844 ntBASIC14.15□□□□□ -0.14
NR4A1P22736 AL645939.2-201ENST00000427340 991 ntBASIC14.15□□□□□ -0.14
NR4A1P22736 AC245100.5-201ENST00000452108 331 ntBASIC14.15□□□□□ -0.14
NR4A1P22736 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NR4A1P22736 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NR4A1P22736 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
NR4A1P22736 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.15□□□□□ -0.14
NR4A1P22736 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.15□□□□□ -0.14
NR4A1P22736 AC093028.1-201ENST00000622998 982 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms