Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.81□□□□□ -0.2
CD53P19397 AC007686.3-201ENST00000619017 3487 ntBASIC13.81□□□□□ -0.2
CD53P19397 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.81□□□□□ -0.2
CD53P19397 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.81□□□□□ -0.2
CD53P19397 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.81□□□□□ -0.2
CD53P19397 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.81□□□□□ -0.2
CD53P19397 GHSR-202ENST00000427970 912 ntBASIC13.81□□□□□ -0.2
CD53P19397 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.81□□□□□ -0.2
CD53P19397 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.81□□□□□ -0.2
CD53P19397 AL589987.1-201ENST00000453380 819 ntBASIC13.81□□□□□ -0.2
CD53P19397 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.81□□□□□ -0.2
CD53P19397 AC007389.4-201ENST00000454674 793 ntBASIC13.81□□□□□ -0.2
CD53P19397 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.81□□□□□ -0.2
CD53P19397 AC119751.2-201ENST00000504529 210 ntBASIC13.81□□□□□ -0.2
CD53P19397 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.81□□□□□ -0.2
CD53P19397 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.81□□□□□ -0.2
CD53P19397 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.81□□□□□ -0.2
CD53P19397 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.81□□□□□ -0.2
CD53P19397 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.81□□□□□ -0.2
CD53P19397 AP005482.1-201ENST00000563722 1273 ntBASIC13.81□□□□□ -0.2
CD53P19397 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.81□□□□□ -0.2
CD53P19397 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.81□□□□□ -0.2
CD53P19397 COX11-210ENST00000639671 696 ntBASIC13.81□□□□□ -0.2
CD53P19397 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.81□□□□□ -0.2
CD53P19397 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.81□□□□□ -0.2
CD53P19397 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.81□□□□□ -0.2
CD53P19397 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC13.81□□□□□ -0.2
CD53P19397 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.81□□□□□ -0.2
CD53P19397 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.81□□□□□ -0.2
CD53P19397 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CD53P19397 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CD53P19397 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CD53P19397 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.81□□□□□ -0.2
CD53P19397 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD53P19397 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CD53P19397 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD53P19397 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD53P19397 POM121L4P-202ENST00000427789 1891 ntBASIC13.8□□□□□ -0.2
CD53P19397 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.8□□□□□ -0.2
CD53P19397 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.8□□□□□ -0.2
CD53P19397 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD53P19397 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD53P19397 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD53P19397 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD53P19397 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD53P19397 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.8□□□□□ -0.2
CD53P19397 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
CD53P19397 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD53P19397 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD53P19397 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CD53P19397 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC13.8□□□□□ -0.2
CD53P19397 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CD53P19397 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD53P19397 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD53P19397 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
CD53P19397 AC136604.1-201ENST00000418535 575 ntBASIC13.8□□□□□ -0.2
CD53P19397 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.8□□□□□ -0.2
CD53P19397 AC098850.1-201ENST00000419919 790 ntBASIC13.8□□□□□ -0.2
CD53P19397 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.8□□□□□ -0.2
CD53P19397 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.8□□□□□ -0.2
CD53P19397 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.8□□□□□ -0.2
CD53P19397 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD53P19397 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.8□□□□□ -0.2
CD53P19397 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.8□□□□□ -0.2
CD53P19397 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.8□□□□□ -0.2
CD53P19397 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.8□□□□□ -0.2
CD53P19397 HNRNPUP1-201ENST00000554987 333 ntBASIC13.8□□□□□ -0.2
CD53P19397 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD53P19397 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.8□□□□□ -0.2
CD53P19397 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.8□□□□□ -0.2
CD53P19397 AL606495.2-201ENST00000605867 535 ntBASIC13.8□□□□□ -0.2
CD53P19397 AC133552.6-201ENST00000613406 534 ntBASIC13.8□□□□□ -0.2
CD53P19397 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CD53P19397 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.8□□□□□ -0.2
CD53P19397 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD53P19397 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CD53P19397 AC136759.1-202ENST00000530858 2194 ntBASIC13.8□□□□□ -0.2
CD53P19397 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
CD53P19397 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD53P19397 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms