Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RETP07949 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RETP07949 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.23■□□□□ 0.03
RETP07949 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.23■□□□□ 0.03
RETP07949 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 AC087481.3-201ENST00000602886 1894 ntBASIC15.23■□□□□ 0.03
RETP07949 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.23■□□□□ 0.03
RETP07949 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RETP07949 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 RNU1-114P-201ENST00000365297 166 ntBASIC15.23■□□□□ 0.03
RETP07949 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.23■□□□□ 0.03
RETP07949 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.23■□□□□ 0.03
RETP07949 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.23■□□□□ 0.03
RETP07949 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.23■□□□□ 0.03
RETP07949 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
RETP07949 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.23■□□□□ 0.03
RETP07949 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 AC134407.2-201ENST00000625089 1978 ntBASIC15.23■□□□□ 0.03
RETP07949 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.23■□□□□ 0.03
RETP07949 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.23■□□□□ 0.03
RETP07949 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
RETP07949 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.23■□□□□ 0.03
RETP07949 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.23■□□□□ 0.03
RETP07949 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RETP07949 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RETP07949 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RETP07949 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.22■□□□□ 0.03
RETP07949 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.22■□□□□ 0.03
RETP07949 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RETP07949 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.22■□□□□ 0.03
RETP07949 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.22■□□□□ 0.03
RETP07949 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.22■□□□□ 0.03
RETP07949 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.22■□□□□ 0.03
RETP07949 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.22■□□□□ 0.03
RETP07949 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
RETP07949 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.22■□□□□ 0.03
RETP07949 ZACNP1-201ENST00000612259 710 ntBASIC15.22■□□□□ 0.03
RETP07949 COX6A1P2-201ENST00000620597 330 ntBASIC15.22■□□□□ 0.03
RETP07949 AC011491.1-203ENST00000637688 543 ntBASIC15.22■□□□□ 0.03
RETP07949 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RETP07949 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
RETP07949 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.22■□□□□ 0.03
RETP07949 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RETP07949 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RETP07949 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RETP07949 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.21■□□□□ 0.03
RETP07949 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RETP07949 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RETP07949 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
RETP07949 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RETP07949 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RETP07949 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RETP07949 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.21■□□□□ 0.03
RETP07949 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RETP07949 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.21■□□□□ 0.03
RETP07949 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RETP07949 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RETP07949 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms