Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.05■□□□□ 0.48
POLR3DP05423 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.05■□□□□ 0.48
POLR3DP05423 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.05■□□□□ 0.48
POLR3DP05423 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.05■□□□□ 0.48
POLR3DP05423 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.05■□□□□ 0.48
POLR3DP05423 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC18.05■□□□□ 0.48
POLR3DP05423 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
POLR3DP05423 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
POLR3DP05423 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
POLR3DP05423 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.05■□□□□ 0.48
POLR3DP05423 AL603764.1-201ENST00000636452 321 ntBASIC18.05■□□□□ 0.48
POLR3DP05423 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.05■□□□□ 0.48
POLR3DP05423 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
POLR3DP05423 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 REXO1L4P-201ENST00000605109 1937 ntBASIC18.05■□□□□ 0.48
POLR3DP05423 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.05■□□□□ 0.48
POLR3DP05423 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
POLR3DP05423 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
POLR3DP05423 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3DP05423 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.05■□□□□ 0.48
POLR3DP05423 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.04■□□□□ 0.48
POLR3DP05423 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR3DP05423 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.04■□□□□ 0.48
POLR3DP05423 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR3DP05423 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
POLR3DP05423 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.04■□□□□ 0.48
POLR3DP05423 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR3DP05423 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
POLR3DP05423 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR3DP05423 AC012508.2-201ENST00000567613 1472 ntBASIC18.04■□□□□ 0.48
POLR3DP05423 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.04■□□□□ 0.48
POLR3DP05423 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR3DP05423 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR3DP05423 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR3DP05423 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.04■□□□□ 0.48
POLR3DP05423 FAM8A4P-201ENST00000435433 1213 ntBASIC18.04■□□□□ 0.48
POLR3DP05423 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.04■□□□□ 0.48
POLR3DP05423 PFN1P12-201ENST00000455938 534 ntBASIC18.04■□□□□ 0.48
POLR3DP05423 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR3DP05423 AC108725.1-201ENST00000495472 409 ntBASIC18.04■□□□□ 0.48
POLR3DP05423 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.04■□□□□ 0.48
POLR3DP05423 MIR4525-201ENST00000580000 75 ntBASIC18.04■□□□□ 0.48
POLR3DP05423 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC18.04■□□□□ 0.48
POLR3DP05423 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.04■□□□□ 0.48
POLR3DP05423 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.04■□□□□ 0.48
POLR3DP05423 AC091271.1-201ENST00000611877 1162 ntBASIC18.04■□□□□ 0.48
POLR3DP05423 MIR6869-201ENST00000619434 62 ntBASIC18.04■□□□□ 0.48
POLR3DP05423 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC18.04■□□□□ 0.48
POLR3DP05423 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR3DP05423 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
POLR3DP05423 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
POLR3DP05423 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.04■□□□□ 0.48
POLR3DP05423 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
POLR3DP05423 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR3DP05423 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
POLR3DP05423 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR3DP05423 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR3DP05423 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR3DP05423 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR3DP05423 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
POLR3DP05423 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
POLR3DP05423 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR3DP05423 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR3DP05423 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR3DP05423 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.04■□□□□ 0.48
POLR3DP05423 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
POLR3DP05423 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR3DP05423 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR3DP05423 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR3DP05423 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
POLR3DP05423 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR3DP05423 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.03■□□□□ 0.48
POLR3DP05423 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR3DP05423 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR3DP05423 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms