Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.34□□□□□ -0.11
MT-ND1P03886 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.34□□□□□ -0.11
MT-ND1P03886 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.34□□□□□ -0.11
MT-ND1P03886 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.34□□□□□ -0.11
MT-ND1P03886 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
MT-ND1P03886 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MT-ND1P03886 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.34□□□□□ -0.11
MT-ND1P03886 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MT-ND1P03886 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.33□□□□□ -0.11
MT-ND1P03886 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MT-ND1P03886 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MT-ND1P03886 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MT-ND1P03886 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MT-ND1P03886 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MT-ND1P03886 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.33□□□□□ -0.11
MT-ND1P03886 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MT-ND1P03886 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
MT-ND1P03886 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MT-ND1P03886 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
MT-ND1P03886 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.33□□□□□ -0.12
MT-ND1P03886 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.33□□□□□ -0.12
MT-ND1P03886 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.33□□□□□ -0.12
MT-ND1P03886 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
MT-ND1P03886 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.33□□□□□ -0.12
MT-ND1P03886 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
MT-ND1P03886 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
MT-ND1P03886 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.33□□□□□ -0.12
MT-ND1P03886 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.33□□□□□ -0.12
MT-ND1P03886 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.33□□□□□ -0.12
MT-ND1P03886 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.33□□□□□ -0.12
MT-ND1P03886 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.33□□□□□ -0.12
MT-ND1P03886 AP000344.2-201ENST00000512987 629 ntBASIC14.33□□□□□ -0.12
MT-ND1P03886 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 BANF1P1-201ENST00000553684 263 ntBASIC14.33□□□□□ -0.12
MT-ND1P03886 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.33□□□□□ -0.12
MT-ND1P03886 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.33□□□□□ -0.12
MT-ND1P03886 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.33□□□□□ -0.12
MT-ND1P03886 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.33□□□□□ -0.12
MT-ND1P03886 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.33□□□□□ -0.12
MT-ND1P03886 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
MT-ND1P03886 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MT-ND1P03886 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MT-ND1P03886 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
MT-ND1P03886 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.33□□□□□ -0.12
MT-ND1P03886 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 AC005562.1-201ENST00000583030 3219 ntBASIC14.33□□□□□ -0.12
MT-ND1P03886 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND1P03886 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.33□□□□□ -0.12
MT-ND1P03886 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
MT-ND1P03886 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
MT-ND1P03886 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MT-ND1P03886 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.32□□□□□ -0.12
MT-ND1P03886 AC007787.1-201ENST00000588095 1583 ntBASIC14.32□□□□□ -0.12
MT-ND1P03886 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
MT-ND1P03886 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
MT-ND1P03886 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
MT-ND1P03886 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
MT-ND1P03886 FO393414.2-201ENST00000405153 598 ntBASIC14.32□□□□□ -0.12
MT-ND1P03886 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.32□□□□□ -0.12
MT-ND1P03886 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.32□□□□□ -0.12
MT-ND1P03886 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
MT-ND1P03886 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.32□□□□□ -0.12
MT-ND1P03886 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.32□□□□□ -0.12
MT-ND1P03886 AC093520.2-201ENST00000561830 333 ntBASIC14.32□□□□□ -0.12
MT-ND1P03886 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms