Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
IFNA1P01562 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.01□□□□□ -0.49
IFNA1P01562 DUSP5P1-201ENST00000441325 1139 ntBASIC12.01□□□□□ -0.49
IFNA1P01562 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.01□□□□□ -0.49
IFNA1P01562 SCARNA2-201ENST00000458748 420 ntBASIC12.01□□□□□ -0.49
IFNA1P01562 AC136632.2-201ENST00000512891 861 ntBASIC12.01□□□□□ -0.49
IFNA1P01562 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.01□□□□□ -0.49
IFNA1P01562 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.01□□□□□ -0.49
IFNA1P01562 HNRNPUP1-201ENST00000554987 333 ntBASIC12.01□□□□□ -0.49
IFNA1P01562 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.01□□□□□ -0.49
IFNA1P01562 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.01□□□□□ -0.49
IFNA1P01562 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
IFNA1P01562 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.01□□□□□ -0.49
IFNA1P01562 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
IFNA1P01562 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.01□□□□□ -0.49
IFNA1P01562 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.01□□□□□ -0.49
IFNA1P01562 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.01□□□□□ -0.49
IFNA1P01562 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
IFNA1P01562 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.01□□□□□ -0.49
IFNA1P01562 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC12.01□□□□□ -0.49
IFNA1P01562 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
IFNA1P01562 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
IFNA1P01562 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
IFNA1P01562 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.01□□□□□ -0.49
IFNA1P01562 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
IFNA1P01562 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.01□□□□□ -0.49
IFNA1P01562 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
IFNA1P01562 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.01□□□□□ -0.49
IFNA1P01562 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
IFNA1P01562 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12□□□□□ -0.49
IFNA1P01562 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 NUTM2HP-201ENST00000442076 2498 ntBASIC12□□□□□ -0.49
IFNA1P01562 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 INE2-201ENST00000630399 1874 ntBASIC12□□□□□ -0.49
IFNA1P01562 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
IFNA1P01562 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12□□□□□ -0.49
IFNA1P01562 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
IFNA1P01562 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
IFNA1P01562 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
IFNA1P01562 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12□□□□□ -0.49
IFNA1P01562 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 MED22-202ENST00000371999 987 ntTSL 3 BASIC12□□□□□ -0.49
IFNA1P01562 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12□□□□□ -0.49
IFNA1P01562 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
IFNA1P01562 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12□□□□□ -0.49
IFNA1P01562 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 AL513480.1-201ENST00000451731 511 ntBASIC12□□□□□ -0.49
IFNA1P01562 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12□□□□□ -0.49
IFNA1P01562 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12□□□□□ -0.49
IFNA1P01562 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12□□□□□ -0.49
IFNA1P01562 AL009183.1-201ENST00000603760 355 ntBASIC12□□□□□ -0.49
IFNA1P01562 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
IFNA1P01562 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
IFNA1P01562 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12□□□□□ -0.49
IFNA1P01562 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
IFNA1P01562 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
IFNA1P01562 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12□□□□□ -0.49
IFNA1P01562 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12□□□□□ -0.49
IFNA1P01562 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12□□□□□ -0.49
IFNA1P01562 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12□□□□□ -0.49
IFNA1P01562 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
IFNA1P01562 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
IFNA1P01562 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12□□□□□ -0.49
IFNA1P01562 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12□□□□□ -0.49
IFNA1P01562 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
IFNA1P01562 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12□□□□□ -0.49
IFNA1P01562 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12□□□□□ -0.49
IFNA1P01562 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms