Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.36□□□□□ -0.11
SCN2BO60939 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SCN2BO60939 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.36□□□□□ -0.11
SCN2BO60939 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SCN2BO60939 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SCN2BO60939 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SCN2BO60939 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCN2BO60939 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SCN2BO60939 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SCN2BO60939 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.35□□□□□ -0.11
SCN2BO60939 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.35□□□□□ -0.11
SCN2BO60939 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.35□□□□□ -0.11
SCN2BO60939 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SCN2BO60939 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.35□□□□□ -0.11
SCN2BO60939 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
SCN2BO60939 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SCN2BO60939 AL645937.2-201ENST00000396808 931 ntBASIC14.35□□□□□ -0.11
SCN2BO60939 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.35□□□□□ -0.11
SCN2BO60939 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.35□□□□□ -0.11
SCN2BO60939 FAM86LP-201ENST00000478302 853 ntBASIC14.35□□□□□ -0.11
SCN2BO60939 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
SCN2BO60939 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 AC135586.1-201ENST00000539323 574 ntBASIC14.35□□□□□ -0.11
SCN2BO60939 AC107373.2-201ENST00000607735 490 ntBASIC14.35□□□□□ -0.11
SCN2BO60939 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SCN2BO60939 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SCN2BO60939 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SCN2BO60939 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
SCN2BO60939 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.35□□□□□ -0.11
SCN2BO60939 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.35□□□□□ -0.11
SCN2BO60939 KRT18P28-201ENST00000453838 1332 ntBASIC14.35□□□□□ -0.11
SCN2BO60939 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SCN2BO60939 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SCN2BO60939 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCN2BO60939 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.34□□□□□ -0.11
SCN2BO60939 AC018665.1-201ENST00000622927 1362 ntBASIC14.34□□□□□ -0.11
SCN2BO60939 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.34□□□□□ -0.11
SCN2BO60939 AC022144.1-201ENST00000602255 1580 ntBASIC14.34□□□□□ -0.11
SCN2BO60939 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
SCN2BO60939 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.34□□□□□ -0.11
SCN2BO60939 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.34□□□□□ -0.11
SCN2BO60939 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.34□□□□□ -0.11
SCN2BO60939 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.34□□□□□ -0.11
SCN2BO60939 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.34□□□□□ -0.11
SCN2BO60939 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 MRPS18AP1-201ENST00000414458 589 ntBASIC14.34□□□□□ -0.11
SCN2BO60939 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.34□□□□□ -0.11
SCN2BO60939 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.34□□□□□ -0.11
SCN2BO60939 METTL21AP1-201ENST00000438852 635 ntBASIC14.34□□□□□ -0.11
SCN2BO60939 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.34□□□□□ -0.11
SCN2BO60939 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 PRSS30P-206ENST00000641773 873 ntBASIC14.34□□□□□ -0.11
SCN2BO60939 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SCN2BO60939 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SCN2BO60939 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.34□□□□□ -0.11
SCN2BO60939 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms