Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 AC009093.2-202ENST00000620513 2079 ntBASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 FGD5P1-202ENST00000614866 2498 ntBASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 AP000593.2-201ENST00000542775 1433 ntBASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 AC007969.1-201ENST00000433675 447 ntBASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 AC244107.1-201ENST00000442033 332 ntBASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 YBX1P6-201ENST00000442962 1002 ntBASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 CNN2P10-201ENST00000443067 918 ntBASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 RN7SL713P-201ENST00000582127 302 ntBASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 MIR6752-201ENST00000618442 71 ntBASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 SALL4P5-201ENST00000419001 1760 ntBASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 LINC01101-201ENST00000622953 1884 ntBASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 AC018442.1-201ENST00000421439 2061 ntBASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YJEFN3A6XGL0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
YJEFN3A6XGL0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.68■□□□□ 0.1
YJEFN3A6XGL0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.68■□□□□ 0.1
YJEFN3A6XGL0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
YJEFN3A6XGL0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YJEFN3A6XGL0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.68■□□□□ 0.1
YJEFN3A6XGL0 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.68■□□□□ 0.1
YJEFN3A6XGL0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
YJEFN3A6XGL0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
YJEFN3A6XGL0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.68■□□□□ 0.1
YJEFN3A6XGL0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms