Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 AC018442.1-201ENST00000421439 2061 ntBASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 KRT8P14-201ENST00000414254 1442 ntBASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 LINC00552-201ENST00000625151 2579 ntBASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CCDC162PA2VCL2 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 KLF2P2-201ENST00000416807 1039 ntBASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 AC114812.1-204ENST00000449669 728 ntBASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 AC092364.2-202ENST00000597012 1073 ntBASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 MTHFR-210ENST00000641407 2387 ntBASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 AL161772.1-201ENST00000610494 4412 ntBASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC162PA2VCL2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 AC007292.2-201ENST00000593524 1812 ntBASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC162PA2VCL2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms