Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 SPDYE9P-201ENST00000570642 692 ntBASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 SPDYE10P-202ENST00000612005 668 ntBASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 SPDYE8P-202ENST00000612377 668 ntBASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 KRT8P12-202ENST00000472924 1397 ntBASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 Z97205.2-201ENST00000564697 1639 ntBASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 AC079140.1-201ENST00000508039 487 ntBASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 SLC25A39P2-201ENST00000537614 270 ntBASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 AC026120.1-201ENST00000611536 926 ntBASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.31□□□□□ -0.28
TRDV1A0A1B0GX56 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms