Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 KRT16P3-201ENST00000439127 1283 ntBASIC21.6■■□□□ 1.05
PCDHGB6Q9Y5F9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDHGB6Q9Y5F9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PCDHGB6Q9Y5F9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB6Q9Y5F9 AC079834.2-201ENST00000609776 1949 ntBASIC21.6■■□□□ 1.05
PCDHGB6Q9Y5F9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB6Q9Y5F9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB6Q9Y5F9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB6Q9Y5F9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB6Q9Y5F9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB6Q9Y5F9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB6Q9Y5F9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB6Q9Y5F9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB6Q9Y5F9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.59■■□□□ 1.05
PCDHGB6Q9Y5F9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.59■■□□□ 1.05
PCDHGB6Q9Y5F9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB6Q9Y5F9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.59■■□□□ 1.05
PCDHGB6Q9Y5F9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHGB6Q9Y5F9 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHGB6Q9Y5F9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB6Q9Y5F9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB6Q9Y5F9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB6Q9Y5F9 AC068473.5-201ENST00000616428 2072 ntBASIC21.59■■□□□ 1.05
PCDHGB6Q9Y5F9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHGB6Q9Y5F9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDHGB6Q9Y5F9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PCDHGB6Q9Y5F9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHGB6Q9Y5F9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PCDHGB6Q9Y5F9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
PCDHGB6Q9Y5F9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
PCDHGB6Q9Y5F9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PCDHGB6Q9Y5F9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
PCDHGB6Q9Y5F9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHGB6Q9Y5F9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDHGB6Q9Y5F9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDHGB6Q9Y5F9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHGB6Q9Y5F9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB6Q9Y5F9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB6Q9Y5F9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB6Q9Y5F9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB6Q9Y5F9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB6Q9Y5F9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB6Q9Y5F9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHGB6Q9Y5F9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB6Q9Y5F9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHGB6Q9Y5F9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB6Q9Y5F9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB6Q9Y5F9 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB6Q9Y5F9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB6Q9Y5F9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDHGB6Q9Y5F9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB6Q9Y5F9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB6Q9Y5F9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB6Q9Y5F9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB6Q9Y5F9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB6Q9Y5F9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDHGB6Q9Y5F9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB6Q9Y5F9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB6Q9Y5F9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB6Q9Y5F9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.54■■□□□ 1.04
PCDHGB6Q9Y5F9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB6Q9Y5F9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB6Q9Y5F9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB6Q9Y5F9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB6Q9Y5F9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGB6Q9Y5F9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGB6Q9Y5F9 AC008406.3-201ENST00000620001 1374 ntBASIC21.53■■□□□ 1.04
PCDHGB6Q9Y5F9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PCDHGB6Q9Y5F9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGB6Q9Y5F9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.53■■□□□ 1.04
PCDHGB6Q9Y5F9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGB6Q9Y5F9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGB6Q9Y5F9 FOXO3B-201ENST00000395675 1928 ntBASIC21.53■■□□□ 1.04
PCDHGB6Q9Y5F9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHGB6Q9Y5F9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGB6Q9Y5F9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGB6Q9Y5F9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGB6Q9Y5F9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGB6Q9Y5F9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGB6Q9Y5F9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHGB6Q9Y5F9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHGB6Q9Y5F9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGB6Q9Y5F9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGB6Q9Y5F9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGB6Q9Y5F9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGB6Q9Y5F9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB6Q9Y5F9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB6Q9Y5F9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB6Q9Y5F9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHGB6Q9Y5F9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PCDHGB6Q9Y5F9 CLDN5-201ENST00000403084 2357 ntBASIC21.51■■□□□ 1.03
PCDHGB6Q9Y5F9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PCDHGB6Q9Y5F9 TSPY9P-201ENST00000440215 945 ntBASIC21.51■■□□□ 1.03
PCDHGB6Q9Y5F9 TSPY11P-201ENST00000442607 1045 ntBASIC21.51■■□□□ 1.03
PCDHGB6Q9Y5F9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB6Q9Y5F9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB6Q9Y5F9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB6Q9Y5F9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHGB6Q9Y5F9 AC138932.3-201ENST00000567634 1902 ntBASIC21.51■■□□□ 1.03
PCDHGB6Q9Y5F9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms