Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGC4Q9Y5F7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
PCDHGC4Q9Y5F7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGC4Q9Y5F7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHGC4Q9Y5F7 SNX5-217ENST00000606557 1087 ntBASIC23.26■■□□□ 1.31
PCDHGC4Q9Y5F7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGC4Q9Y5F7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGC4Q9Y5F7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGC4Q9Y5F7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGC4Q9Y5F7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGC4Q9Y5F7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGC4Q9Y5F7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.25■■□□□ 1.31
PCDHGC4Q9Y5F7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGC4Q9Y5F7 AC004448.1-201ENST00000458332 883 ntBASIC23.25■■□□□ 1.31
PCDHGC4Q9Y5F7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGC4Q9Y5F7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGC4Q9Y5F7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGC4Q9Y5F7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGC4Q9Y5F7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGC4Q9Y5F7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGC4Q9Y5F7 LINC00543-201ENST00000567234 1845 ntBASIC23.24■■□□□ 1.31
PCDHGC4Q9Y5F7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHGC4Q9Y5F7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGC4Q9Y5F7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGC4Q9Y5F7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGC4Q9Y5F7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
PCDHGC4Q9Y5F7 UNC93B8-201ENST00000511903 705 ntBASIC23.24■■□□□ 1.31
PCDHGC4Q9Y5F7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGC4Q9Y5F7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGC4Q9Y5F7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGC4Q9Y5F7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
PCDHGC4Q9Y5F7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHGC4Q9Y5F7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHGC4Q9Y5F7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHGC4Q9Y5F7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGC4Q9Y5F7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHGC4Q9Y5F7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGC4Q9Y5F7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGC4Q9Y5F7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
PCDHGC4Q9Y5F7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.22■■□□□ 1.31
PCDHGC4Q9Y5F7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGC4Q9Y5F7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGC4Q9Y5F7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
PCDHGC4Q9Y5F7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGC4Q9Y5F7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHGC4Q9Y5F7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHGC4Q9Y5F7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGC4Q9Y5F7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGC4Q9Y5F7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHGC4Q9Y5F7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHGC4Q9Y5F7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGC4Q9Y5F7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGC4Q9Y5F7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
PCDHGC4Q9Y5F7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGC4Q9Y5F7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGC4Q9Y5F7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGC4Q9Y5F7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.2■■□□□ 1.3
PCDHGC4Q9Y5F7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHGC4Q9Y5F7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGC4Q9Y5F7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGC4Q9Y5F7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHGC4Q9Y5F7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGC4Q9Y5F7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGC4Q9Y5F7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
PCDHGC4Q9Y5F7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGC4Q9Y5F7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGC4Q9Y5F7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
PCDHGC4Q9Y5F7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGC4Q9Y5F7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGC4Q9Y5F7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.18■■□□□ 1.3
PCDHGC4Q9Y5F7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.18■■□□□ 1.3
PCDHGC4Q9Y5F7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHGC4Q9Y5F7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHGC4Q9Y5F7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGC4Q9Y5F7 MTDHP2-201ENST00000601468 714 ntBASIC23.18■■□□□ 1.3
PCDHGC4Q9Y5F7 AC010997.5-201ENST00000609182 354 ntBASIC23.18■■□□□ 1.3
PCDHGC4Q9Y5F7 AC004812.2-201ENST00000611079 2094 ntBASIC23.18■■□□□ 1.3
PCDHGC4Q9Y5F7 AC141586.4-201ENST00000624558 1573 ntBASIC23.18■■□□□ 1.3
PCDHGC4Q9Y5F7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGC4Q9Y5F7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PCDHGC4Q9Y5F7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGC4Q9Y5F7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHGC4Q9Y5F7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.17■■□□□ 1.3
PCDHGC4Q9Y5F7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGC4Q9Y5F7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGC4Q9Y5F7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.17■■□□□ 1.3
PCDHGC4Q9Y5F7 AL161729.1-201ENST00000604104 1402 ntBASIC23.16■■□□□ 1.3
PCDHGC4Q9Y5F7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
PCDHGC4Q9Y5F7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGC4Q9Y5F7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PCDHGC4Q9Y5F7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PCDHGC4Q9Y5F7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.16■■□□□ 1.3
PCDHGC4Q9Y5F7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGC4Q9Y5F7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGC4Q9Y5F7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
PCDHGC4Q9Y5F7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGC4Q9Y5F7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGC4Q9Y5F7 KRT16P3-201ENST00000439127 1283 ntBASIC23.15■■□□□ 1.3
PCDHGC4Q9Y5F7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PCDHGC4Q9Y5F7 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms