Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CTDP1Q9Y5B0 AL022069.1-201ENST00000568025 1636 ntBASIC26.61■■□□□ 1.85
CTDP1Q9Y5B0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.61■■□□□ 1.85
CTDP1Q9Y5B0 AC131274.2-201ENST00000580697 1507 ntBASIC26.61■■□□□ 1.85
CTDP1Q9Y5B0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.61■■□□□ 1.85
CTDP1Q9Y5B0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.61■■□□□ 1.85
CTDP1Q9Y5B0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.61■■□□□ 1.85
CTDP1Q9Y5B0 AC005837.3-201ENST00000612163 286 ntBASIC26.61■■□□□ 1.85
CTDP1Q9Y5B0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.61■■□□□ 1.85
CTDP1Q9Y5B0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.61■■□□□ 1.85
CTDP1Q9Y5B0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CTDP1Q9Y5B0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CTDP1Q9Y5B0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CTDP1Q9Y5B0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
CTDP1Q9Y5B0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CTDP1Q9Y5B0 PBX2P1-201ENST00000493219 1291 ntBASIC26.6■■□□□ 1.85
CTDP1Q9Y5B0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.6■■□□□ 1.85
CTDP1Q9Y5B0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CTDP1Q9Y5B0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
CTDP1Q9Y5B0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CTDP1Q9Y5B0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
CTDP1Q9Y5B0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CTDP1Q9Y5B0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.59■■□□□ 1.85
CTDP1Q9Y5B0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.59■■□□□ 1.85
CTDP1Q9Y5B0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CTDP1Q9Y5B0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
CTDP1Q9Y5B0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.58■■□□□ 1.85
CTDP1Q9Y5B0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CTDP1Q9Y5B0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CTDP1Q9Y5B0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CTDP1Q9Y5B0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CTDP1Q9Y5B0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CTDP1Q9Y5B0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
CTDP1Q9Y5B0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CTDP1Q9Y5B0 UNC93B3-201ENST00000308076 687 ntBASIC26.57■■□□□ 1.84
CTDP1Q9Y5B0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.57■■□□□ 1.84
CTDP1Q9Y5B0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
CTDP1Q9Y5B0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.57■■□□□ 1.84
CTDP1Q9Y5B0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.57■■□□□ 1.84
CTDP1Q9Y5B0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.57■■□□□ 1.84
CTDP1Q9Y5B0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.56■■□□□ 1.84
CTDP1Q9Y5B0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CTDP1Q9Y5B0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CTDP1Q9Y5B0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CTDP1Q9Y5B0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CTDP1Q9Y5B0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
CTDP1Q9Y5B0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CTDP1Q9Y5B0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.55■■□□□ 1.84
CTDP1Q9Y5B0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.55■■□□□ 1.84
CTDP1Q9Y5B0 AC133561.4-201ENST00000566112 224 ntBASIC26.55■■□□□ 1.84
CTDP1Q9Y5B0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CTDP1Q9Y5B0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.55■■□□□ 1.84
CTDP1Q9Y5B0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CTDP1Q9Y5B0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
CTDP1Q9Y5B0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CTDP1Q9Y5B0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.54■■□□□ 1.84
CTDP1Q9Y5B0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CTDP1Q9Y5B0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.54■■□□□ 1.84
CTDP1Q9Y5B0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CTDP1Q9Y5B0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
CTDP1Q9Y5B0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.54■■□□□ 1.84
CTDP1Q9Y5B0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CTDP1Q9Y5B0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CTDP1Q9Y5B0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CTDP1Q9Y5B0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CTDP1Q9Y5B0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CTDP1Q9Y5B0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CTDP1Q9Y5B0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CTDP1Q9Y5B0 AL136162.1-201ENST00000607711 1078 ntBASIC26.53■■□□□ 1.84
CTDP1Q9Y5B0 AC106739.1-201ENST00000617035 715 ntBASIC26.53■■□□□ 1.84
CTDP1Q9Y5B0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
CTDP1Q9Y5B0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CTDP1Q9Y5B0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CTDP1Q9Y5B0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CTDP1Q9Y5B0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CTDP1Q9Y5B0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.52■■□□□ 1.84
CTDP1Q9Y5B0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CTDP1Q9Y5B0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.52■■□□□ 1.84
CTDP1Q9Y5B0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
CTDP1Q9Y5B0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.52■■□□□ 1.84
CTDP1Q9Y5B0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CTDP1Q9Y5B0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CTDP1Q9Y5B0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CTDP1Q9Y5B0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CTDP1Q9Y5B0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
CTDP1Q9Y5B0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.51■■□□□ 1.83
CTDP1Q9Y5B0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.51■■□□□ 1.83
CTDP1Q9Y5B0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.51■■□□□ 1.83
CTDP1Q9Y5B0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CTDP1Q9Y5B0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CTDP1Q9Y5B0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.5■■□□□ 1.83
CTDP1Q9Y5B0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CTDP1Q9Y5B0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.5■■□□□ 1.83
CTDP1Q9Y5B0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CTDP1Q9Y5B0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CTDP1Q9Y5B0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CTDP1Q9Y5B0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CTDP1Q9Y5B0 AC135279.3-201ENST00000610945 1311 ntBASIC26.49■■□□□ 1.83
CTDP1Q9Y5B0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CTDP1Q9Y5B0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms