Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
AP4S1Q9Y587 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
AP4S1Q9Y587 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.69■■□□□ 1.06
AP4S1Q9Y587 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP4S1Q9Y587 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.69■■□□□ 1.06
AP4S1Q9Y587 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP4S1Q9Y587 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
AP4S1Q9Y587 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.69■■□□□ 1.06
AP4S1Q9Y587 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP4S1Q9Y587 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP4S1Q9Y587 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP4S1Q9Y587 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP4S1Q9Y587 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP4S1Q9Y587 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP4S1Q9Y587 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP4S1Q9Y587 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP4S1Q9Y587 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.68■■□□□ 1.06
AP4S1Q9Y587 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP4S1Q9Y587 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP4S1Q9Y587 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.68■■□□□ 1.06
AP4S1Q9Y587 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP4S1Q9Y587 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP4S1Q9Y587 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP4S1Q9Y587 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
AP4S1Q9Y587 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP4S1Q9Y587 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP4S1Q9Y587 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.68■■□□□ 1.06
AP4S1Q9Y587 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
AP4S1Q9Y587 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP4S1Q9Y587 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
AP4S1Q9Y587 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.67■■□□□ 1.06
AP4S1Q9Y587 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
AP4S1Q9Y587 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
AP4S1Q9Y587 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
AP4S1Q9Y587 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
AP4S1Q9Y587 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
AP4S1Q9Y587 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
AP4S1Q9Y587 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
AP4S1Q9Y587 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
AP4S1Q9Y587 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
AP4S1Q9Y587 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.66■■□□□ 1.06
AP4S1Q9Y587 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
AP4S1Q9Y587 AC092068.2-201ENST00000590491 1708 ntBASIC21.66■■□□□ 1.06
AP4S1Q9Y587 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
AP4S1Q9Y587 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
AP4S1Q9Y587 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
AP4S1Q9Y587 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.65■■□□□ 1.06
AP4S1Q9Y587 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP4S1Q9Y587 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP4S1Q9Y587 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP4S1Q9Y587 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
AP4S1Q9Y587 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
AP4S1Q9Y587 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
AP4S1Q9Y587 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP4S1Q9Y587 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP4S1Q9Y587 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP4S1Q9Y587 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP4S1Q9Y587 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP4S1Q9Y587 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP4S1Q9Y587 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
AP4S1Q9Y587 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
AP4S1Q9Y587 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP4S1Q9Y587 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
AP4S1Q9Y587 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.64■■□□□ 1.06
AP4S1Q9Y587 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
AP4S1Q9Y587 ECEL1P1-201ENST00000373592 1742 ntBASIC21.64■■□□□ 1.06
AP4S1Q9Y587 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
AP4S1Q9Y587 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.64■■□□□ 1.05
AP4S1Q9Y587 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
AP4S1Q9Y587 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AP4S1Q9Y587 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AP4S1Q9Y587 PKD1P6-201ENST00000343738 4769 ntBASIC21.63■■□□□ 1.05
AP4S1Q9Y587 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
AP4S1Q9Y587 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AP4S1Q9Y587 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
AP4S1Q9Y587 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
AP4S1Q9Y587 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
AP4S1Q9Y587 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.63■■□□□ 1.05
AP4S1Q9Y587 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.63■■□□□ 1.05
AP4S1Q9Y587 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
AP4S1Q9Y587 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP4S1Q9Y587 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
AP4S1Q9Y587 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP4S1Q9Y587 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP4S1Q9Y587 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.62■■□□□ 1.05
AP4S1Q9Y587 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.62■■□□□ 1.05
AP4S1Q9Y587 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
AP4S1Q9Y587 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP4S1Q9Y587 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.62■■□□□ 1.05
AP4S1Q9Y587 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP4S1Q9Y587 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.62■■□□□ 1.05
AP4S1Q9Y587 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
AP4S1Q9Y587 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
AP4S1Q9Y587 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP4S1Q9Y587 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP4S1Q9Y587 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.61■■□□□ 1.05
AP4S1Q9Y587 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.61■■□□□ 1.05
AP4S1Q9Y587 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
AP4S1Q9Y587 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP4S1Q9Y587 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms