Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.17■□□□□ 0.82
COMMD3Q9UBI1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
COMMD3Q9UBI1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COMMD3Q9UBI1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COMMD3Q9UBI1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COMMD3Q9UBI1 GUSBP5-202ENST00000510805 1989 ntBASIC20.17■□□□□ 0.82
COMMD3Q9UBI1 AL024507.2-201ENST00000606070 2574 ntBASIC20.17■□□□□ 0.82
COMMD3Q9UBI1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COMMD3Q9UBI1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.17■□□□□ 0.82
COMMD3Q9UBI1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
COMMD3Q9UBI1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COMMD3Q9UBI1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.16■□□□□ 0.82
COMMD3Q9UBI1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COMMD3Q9UBI1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COMMD3Q9UBI1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.16■□□□□ 0.82
COMMD3Q9UBI1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.16■□□□□ 0.82
COMMD3Q9UBI1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COMMD3Q9UBI1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD3Q9UBI1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.15■□□□□ 0.82
COMMD3Q9UBI1 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.15■□□□□ 0.82
COMMD3Q9UBI1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD3Q9UBI1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD3Q9UBI1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.15■□□□□ 0.82
COMMD3Q9UBI1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
COMMD3Q9UBI1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.15■□□□□ 0.82
COMMD3Q9UBI1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.15■□□□□ 0.82
COMMD3Q9UBI1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
COMMD3Q9UBI1 AC137767.1-201ENST00000602918 1920 ntBASIC20.15■□□□□ 0.82
COMMD3Q9UBI1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.15■□□□□ 0.82
COMMD3Q9UBI1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD3Q9UBI1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
COMMD3Q9UBI1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COMMD3Q9UBI1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 ANOS2P-203ENST00000472227 1816 ntBASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 AC127496.7-201ENST00000625110 1798 ntBASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 DUX4L29-201ENST00000425409 679 ntBASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 AP006261.1-201ENST00000584783 668 ntBASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 AC044849.2-201ENST00000606596 710 ntBASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 AC007375.3-201ENST00000600936 2314 ntBASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD3Q9UBI1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD3Q9UBI1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD3Q9UBI1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.13■□□□□ 0.81
COMMD3Q9UBI1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD3Q9UBI1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD3Q9UBI1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.13■□□□□ 0.81
COMMD3Q9UBI1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.13■□□□□ 0.81
COMMD3Q9UBI1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.13■□□□□ 0.81
COMMD3Q9UBI1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.13■□□□□ 0.81
COMMD3Q9UBI1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD3Q9UBI1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD3Q9UBI1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
COMMD3Q9UBI1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COMMD3Q9UBI1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COMMD3Q9UBI1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.12■□□□□ 0.81
COMMD3Q9UBI1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
COMMD3Q9UBI1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.12■□□□□ 0.81
COMMD3Q9UBI1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COMMD3Q9UBI1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COMMD3Q9UBI1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COMMD3Q9UBI1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.12■□□□□ 0.81
COMMD3Q9UBI1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COMMD3Q9UBI1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
COMMD3Q9UBI1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.11■□□□□ 0.81
COMMD3Q9UBI1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.11■□□□□ 0.81
COMMD3Q9UBI1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COMMD3Q9UBI1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COMMD3Q9UBI1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
COMMD3Q9UBI1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD3Q9UBI1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COMMD3Q9UBI1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.1■□□□□ 0.81
COMMD3Q9UBI1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD3Q9UBI1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD3Q9UBI1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.1■□□□□ 0.81
COMMD3Q9UBI1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD3Q9UBI1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
COMMD3Q9UBI1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COMMD3Q9UBI1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD3Q9UBI1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD3Q9UBI1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
COMMD3Q9UBI1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD3Q9UBI1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COMMD3Q9UBI1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.09■□□□□ 0.81
COMMD3Q9UBI1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COMMD3Q9UBI1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COMMD3Q9UBI1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
COMMD3Q9UBI1 DUSP8P3-201ENST00000399571 1760 ntBASIC20.09■□□□□ 0.81
COMMD3Q9UBI1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.09■□□□□ 0.81
COMMD3Q9UBI1 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms