Protein–RNA interactions for Protein: Q9UBD3

XCL2, Cytokine SCM-1 beta, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCL2Q9UBD3 KRT125P-201ENST00000546827 989 ntBASIC16.93■□□□□ 0.3
XCL2Q9UBD3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.93■□□□□ 0.3
XCL2Q9UBD3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XCL2Q9UBD3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
XCL2Q9UBD3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XCL2Q9UBD3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XCL2Q9UBD3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.92■□□□□ 0.3
XCL2Q9UBD3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.92■□□□□ 0.3
XCL2Q9UBD3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XCL2Q9UBD3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XCL2Q9UBD3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XCL2Q9UBD3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
XCL2Q9UBD3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
XCL2Q9UBD3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
XCL2Q9UBD3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.92■□□□□ 0.3
XCL2Q9UBD3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.92■□□□□ 0.3
XCL2Q9UBD3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
XCL2Q9UBD3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.92■□□□□ 0.3
XCL2Q9UBD3 AC137630.3-201ENST00000607245 391 ntBASIC16.92■□□□□ 0.3
XCL2Q9UBD3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XCL2Q9UBD3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
XCL2Q9UBD3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
XCL2Q9UBD3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
XCL2Q9UBD3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XCL2Q9UBD3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.91■□□□□ 0.3
XCL2Q9UBD3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.91■□□□□ 0.3
XCL2Q9UBD3 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.91■□□□□ 0.3
XCL2Q9UBD3 AC239859.2-201ENST00000444165 318 ntBASIC16.91■□□□□ 0.3
XCL2Q9UBD3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.91■□□□□ 0.3
XCL2Q9UBD3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.91■□□□□ 0.3
XCL2Q9UBD3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
XCL2Q9UBD3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XCL2Q9UBD3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
XCL2Q9UBD3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
XCL2Q9UBD3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
XCL2Q9UBD3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
XCL2Q9UBD3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
XCL2Q9UBD3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.9■□□□□ 0.3
XCL2Q9UBD3 AL022069.1-201ENST00000568025 1636 ntBASIC16.9■□□□□ 0.3
XCL2Q9UBD3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
XCL2Q9UBD3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
XCL2Q9UBD3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.9■□□□□ 0.3
XCL2Q9UBD3 LINC00543-201ENST00000567234 1845 ntBASIC16.9■□□□□ 0.3
XCL2Q9UBD3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XCL2Q9UBD3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XCL2Q9UBD3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
XCL2Q9UBD3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XCL2Q9UBD3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
XCL2Q9UBD3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
XCL2Q9UBD3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.89■□□□□ 0.29
XCL2Q9UBD3 AL035685.1-201ENST00000636663 812 ntBASIC16.89■□□□□ 0.29
XCL2Q9UBD3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XCL2Q9UBD3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
XCL2Q9UBD3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
XCL2Q9UBD3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
XCL2Q9UBD3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
XCL2Q9UBD3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.88■□□□□ 0.29
XCL2Q9UBD3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
XCL2Q9UBD3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XCL2Q9UBD3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XCL2Q9UBD3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XCL2Q9UBD3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XCL2Q9UBD3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XCL2Q9UBD3 Z92544.1-202ENST00000571933 1220 ntBASIC16.88■□□□□ 0.29
XCL2Q9UBD3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.88■□□□□ 0.29
XCL2Q9UBD3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
XCL2Q9UBD3 AC141586.4-201ENST00000624558 1573 ntBASIC16.88■□□□□ 0.29
XCL2Q9UBD3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XCL2Q9UBD3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.88■□□□□ 0.29
XCL2Q9UBD3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
XCL2Q9UBD3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.87■□□□□ 0.29
XCL2Q9UBD3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XCL2Q9UBD3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
XCL2Q9UBD3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XCL2Q9UBD3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.87■□□□□ 0.29
XCL2Q9UBD3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.87■□□□□ 0.29
XCL2Q9UBD3 MIR4787-201ENST00000607364 84 ntBASIC16.87■□□□□ 0.29
XCL2Q9UBD3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.87■□□□□ 0.29
XCL2Q9UBD3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
XCL2Q9UBD3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XCL2Q9UBD3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XCL2Q9UBD3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.87■□□□□ 0.29
XCL2Q9UBD3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.87■□□□□ 0.29
XCL2Q9UBD3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
XCL2Q9UBD3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
XCL2Q9UBD3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
XCL2Q9UBD3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XCL2Q9UBD3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XCL2Q9UBD3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XCL2Q9UBD3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.86■□□□□ 0.29
XCL2Q9UBD3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.86■□□□□ 0.29
XCL2Q9UBD3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
XCL2Q9UBD3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XCL2Q9UBD3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XCL2Q9UBD3 AC021242.3-201ENST00000607598 1377 ntBASIC16.86■□□□□ 0.29
XCL2Q9UBD3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
XCL2Q9UBD3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XCL2Q9UBD3 AC131274.2-201ENST00000580697 1507 ntBASIC16.86■□□□□ 0.29
XCL2Q9UBD3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
XCL2Q9UBD3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms