Protein–RNA interactions for Protein: Q9H8M7

MINDY3, Ubiquitin carboxyl-terminal hydrolase MINDY-3, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3Q9H8M7 AC020928.2-201ENST00000588717 2197 ntBASIC25.28■■□□□ 1.64
MINDY3Q9H8M7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
MINDY3Q9H8M7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MINDY3Q9H8M7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MINDY3Q9H8M7 AL136116.3-201ENST00000402907 1138 ntBASIC25.28■■□□□ 1.64
MINDY3Q9H8M7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MINDY3Q9H8M7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MINDY3Q9H8M7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
MINDY3Q9H8M7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
MINDY3Q9H8M7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.27■■□□□ 1.64
MINDY3Q9H8M7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.27■■□□□ 1.64
MINDY3Q9H8M7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.27■■□□□ 1.64
MINDY3Q9H8M7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
MINDY3Q9H8M7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
MINDY3Q9H8M7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.27■■□□□ 1.64
MINDY3Q9H8M7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
MINDY3Q9H8M7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
MINDY3Q9H8M7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
MINDY3Q9H8M7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MINDY3Q9H8M7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.26■■□□□ 1.63
MINDY3Q9H8M7 AC138932.3-201ENST00000567634 1902 ntBASIC25.26■■□□□ 1.63
MINDY3Q9H8M7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
MINDY3Q9H8M7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.26■■□□□ 1.63
MINDY3Q9H8M7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.26■■□□□ 1.63
MINDY3Q9H8M7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MINDY3Q9H8M7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MINDY3Q9H8M7 AC135731.1-201ENST00000569415 2548 ntBASIC25.26■■□□□ 1.63
MINDY3Q9H8M7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.25■■□□□ 1.63
MINDY3Q9H8M7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
MINDY3Q9H8M7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
MINDY3Q9H8M7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
MINDY3Q9H8M7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.25■■□□□ 1.63
MINDY3Q9H8M7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.25■■□□□ 1.63
MINDY3Q9H8M7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
MINDY3Q9H8M7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.25■■□□□ 1.63
MINDY3Q9H8M7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
MINDY3Q9H8M7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
MINDY3Q9H8M7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
MINDY3Q9H8M7 AL022069.1-201ENST00000568025 1636 ntBASIC25.24■■□□□ 1.63
MINDY3Q9H8M7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
MINDY3Q9H8M7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
MINDY3Q9H8M7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
MINDY3Q9H8M7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
MINDY3Q9H8M7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.23■■□□□ 1.63
MINDY3Q9H8M7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
MINDY3Q9H8M7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
MINDY3Q9H8M7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
MINDY3Q9H8M7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.23■■□□□ 1.63
MINDY3Q9H8M7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
MINDY3Q9H8M7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
MINDY3Q9H8M7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.22■■□□□ 1.63
MINDY3Q9H8M7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
MINDY3Q9H8M7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.22■■□□□ 1.63
MINDY3Q9H8M7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
MINDY3Q9H8M7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
MINDY3Q9H8M7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
MINDY3Q9H8M7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
MINDY3Q9H8M7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
MINDY3Q9H8M7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
MINDY3Q9H8M7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
MINDY3Q9H8M7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
MINDY3Q9H8M7 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.21■■□□□ 1.63
MINDY3Q9H8M7 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.21■■□□□ 1.63
MINDY3Q9H8M7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
MINDY3Q9H8M7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
MINDY3Q9H8M7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.21■■□□□ 1.63
MINDY3Q9H8M7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
MINDY3Q9H8M7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.2■■□□□ 1.62
MINDY3Q9H8M7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.2■■□□□ 1.62
MINDY3Q9H8M7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
MINDY3Q9H8M7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.2■■□□□ 1.62
MINDY3Q9H8M7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
MINDY3Q9H8M7 AC005703.6-201ENST00000623265 1329 ntBASIC25.19■■□□□ 1.62
MINDY3Q9H8M7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
MINDY3Q9H8M7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
MINDY3Q9H8M7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.19■■□□□ 1.62
MINDY3Q9H8M7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
MINDY3Q9H8M7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
MINDY3Q9H8M7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.19■■□□□ 1.62
MINDY3Q9H8M7 AC142381.3-201ENST00000568208 1670 ntBASIC25.19■■□□□ 1.62
MINDY3Q9H8M7 AP003733.4-201ENST00000623785 1697 ntBASIC25.19■■□□□ 1.62
MINDY3Q9H8M7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
MINDY3Q9H8M7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.18■■□□□ 1.62
MINDY3Q9H8M7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
MINDY3Q9H8M7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
MINDY3Q9H8M7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.18■■□□□ 1.62
MINDY3Q9H8M7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
MINDY3Q9H8M7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
MINDY3Q9H8M7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
MINDY3Q9H8M7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
MINDY3Q9H8M7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
MINDY3Q9H8M7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
MINDY3Q9H8M7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.17■■□□□ 1.62
MINDY3Q9H8M7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.17■■□□□ 1.62
MINDY3Q9H8M7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
MINDY3Q9H8M7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
MINDY3Q9H8M7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
MINDY3Q9H8M7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
MINDY3Q9H8M7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
MINDY3Q9H8M7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms