Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LIMD2Q9BT23 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LIMD2Q9BT23 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIMD2Q9BT23 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIMD2Q9BT23 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC13.56□□□□□ -0.24
LIMD2Q9BT23 AL592293.1-201ENST00000502889 1188 ntBASIC13.56□□□□□ -0.24
LIMD2Q9BT23 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC13.56□□□□□ -0.24
LIMD2Q9BT23 MIR6089-201ENST00000616698 64 ntBASIC13.56□□□□□ -0.24
LIMD2Q9BT23 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIMD2Q9BT23 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC13.56□□□□□ -0.24
LIMD2Q9BT23 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LIMD2Q9BT23 FOXO3B-201ENST00000395675 1928 ntBASIC13.56□□□□□ -0.24
LIMD2Q9BT23 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIMD2Q9BT23 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
LIMD2Q9BT23 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC13.56□□□□□ -0.24
LIMD2Q9BT23 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIMD2Q9BT23 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIMD2Q9BT23 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC13.55□□□□□ -0.24
LIMD2Q9BT23 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LIMD2Q9BT23 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIMD2Q9BT23 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIMD2Q9BT23 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC13.55□□□□□ -0.24
LIMD2Q9BT23 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LIMD2Q9BT23 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC13.55□□□□□ -0.24
LIMD2Q9BT23 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC13.55□□□□□ -0.24
LIMD2Q9BT23 ABHD17AP5-201ENST00000580133 923 ntBASIC13.55□□□□□ -0.24
LIMD2Q9BT23 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIMD2Q9BT23 SLC6A10P-202ENST00000431994 2058 ntBASIC13.55□□□□□ -0.24
LIMD2Q9BT23 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIMD2Q9BT23 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIMD2Q9BT23 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIMD2Q9BT23 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC13.55□□□□□ -0.24
LIMD2Q9BT23 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LIMD2Q9BT23 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LIMD2Q9BT23 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIMD2Q9BT23 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIMD2Q9BT23 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIMD2Q9BT23 MED17-227ENST00000640521 2047 ntTSL 5 BASIC13.54□□□□□ -0.24
LIMD2Q9BT23 EED-207ENST00000528180 1745 ntTSL 5 BASIC13.54□□□□□ -0.24
LIMD2Q9BT23 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC13.54□□□□□ -0.24
LIMD2Q9BT23 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LIMD2Q9BT23 IDNK-203ENST00000405990 629 ntTSL 2 BASIC13.54□□□□□ -0.24
LIMD2Q9BT23 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC13.54□□□□□ -0.24
LIMD2Q9BT23 RPS2P7-201ENST00000447334 885 ntBASIC13.54□□□□□ -0.24
LIMD2Q9BT23 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LIMD2Q9BT23 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIMD2Q9BT23 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC13.54□□□□□ -0.24
LIMD2Q9BT23 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LIMD2Q9BT23 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIMD2Q9BT23 AL024507.2-201ENST00000606070 2574 ntBASIC13.54□□□□□ -0.24
LIMD2Q9BT23 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIMD2Q9BT23 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIMD2Q9BT23 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIMD2Q9BT23 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIMD2Q9BT23 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIMD2Q9BT23 AC138932.3-201ENST00000567634 1902 ntBASIC13.53□□□□□ -0.24
LIMD2Q9BT23 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIMD2Q9BT23 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIMD2Q9BT23 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LIMD2Q9BT23 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIMD2Q9BT23 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC13.53□□□□□ -0.24
LIMD2Q9BT23 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIMD2Q9BT23 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC13.53□□□□□ -0.24
LIMD2Q9BT23 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIMD2Q9BT23 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
LIMD2Q9BT23 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIMD2Q9BT23 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIMD2Q9BT23 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIMD2Q9BT23 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC13.52□□□□□ -0.24
LIMD2Q9BT23 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LIMD2Q9BT23 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LIMD2Q9BT23 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC13.52□□□□□ -0.24
LIMD2Q9BT23 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
LIMD2Q9BT23 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LIMD2Q9BT23 BRD4-212ENST00000630599 726 ntTSL 2 BASIC13.52□□□□□ -0.25
LIMD2Q9BT23 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LIMD2Q9BT23 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LIMD2Q9BT23 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC13.52□□□□□ -0.25
LIMD2Q9BT23 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIMD2Q9BT23 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LIMD2Q9BT23 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC13.51□□□□□ -0.25
LIMD2Q9BT23 AC141586.4-201ENST00000624558 1573 ntBASIC13.51□□□□□ -0.25
LIMD2Q9BT23 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LIMD2Q9BT23 AL592295.1-201ENST00000400984 884 ntBASIC13.51□□□□□ -0.25
LIMD2Q9BT23 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LIMD2Q9BT23 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIMD2Q9BT23 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIMD2Q9BT23 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIMD2Q9BT23 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC13.51□□□□□ -0.25
LIMD2Q9BT23 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LIMD2Q9BT23 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LIMD2Q9BT23 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC13.5□□□□□ -0.25
LIMD2Q9BT23 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LIMD2Q9BT23 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIMD2Q9BT23 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIMD2Q9BT23 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC13.5□□□□□ -0.25
LIMD2Q9BT23 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LIMD2Q9BT23 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIMD2Q9BT23 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIMD2Q9BT23 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms