Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HPS1Q92902 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HPS1Q92902 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HPS1Q92902 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
HPS1Q92902 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPS1Q92902 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.71■□□□□ 0.91
HPS1Q92902 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPS1Q92902 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPS1Q92902 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HPS1Q92902 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.71■□□□□ 0.91
HPS1Q92902 AC142472.1-201ENST00000612013 1741 ntBASIC20.71■□□□□ 0.91
HPS1Q92902 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.71■□□□□ 0.91
HPS1Q92902 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPS1Q92902 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.71■□□□□ 0.91
HPS1Q92902 AC025884.2-201ENST00000553429 711 ntBASIC20.71■□□□□ 0.91
HPS1Q92902 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HPS1Q92902 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPS1Q92902 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HPS1Q92902 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPS1Q92902 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPS1Q92902 AL359504.2-201ENST00000605506 1601 ntBASIC20.71■□□□□ 0.91
HPS1Q92902 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HPS1Q92902 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS1Q92902 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
HPS1Q92902 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS1Q92902 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS1Q92902 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HPS1Q92902 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HPS1Q92902 MIR3960-201ENST00000583311 91 ntBASIC20.7■□□□□ 0.9
HPS1Q92902 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
HPS1Q92902 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.7■□□□□ 0.9
HPS1Q92902 AC129492.7-201ENST00000622992 756 ntBASIC20.7■□□□□ 0.9
HPS1Q92902 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS1Q92902 AC009831.1-201ENST00000580420 1582 ntBASIC20.7■□□□□ 0.9
HPS1Q92902 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HPS1Q92902 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS1Q92902 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
HPS1Q92902 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.69■□□□□ 0.9
HPS1Q92902 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.69■□□□□ 0.9
HPS1Q92902 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HPS1Q92902 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HPS1Q92902 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HPS1Q92902 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HPS1Q92902 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HPS1Q92902 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HPS1Q92902 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.69■□□□□ 0.9
HPS1Q92902 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.69■□□□□ 0.9
HPS1Q92902 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HPS1Q92902 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.69■□□□□ 0.9
HPS1Q92902 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HPS1Q92902 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HPS1Q92902 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.69■□□□□ 0.9
HPS1Q92902 AC007375.3-201ENST00000600936 2314 ntBASIC20.69■□□□□ 0.9
HPS1Q92902 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HPS1Q92902 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.68■□□□□ 0.9
HPS1Q92902 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HPS1Q92902 AL592293.1-201ENST00000502889 1188 ntBASIC20.68■□□□□ 0.9
HPS1Q92902 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.68■□□□□ 0.9
HPS1Q92902 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HPS1Q92902 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.68■□□□□ 0.9
HPS1Q92902 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HPS1Q92902 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HPS1Q92902 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.68■□□□□ 0.9
HPS1Q92902 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HPS1Q92902 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HPS1Q92902 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HPS1Q92902 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HPS1Q92902 RP9P-202ENST00000450133 1212 ntBASIC20.67■□□□□ 0.9
HPS1Q92902 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HPS1Q92902 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HPS1Q92902 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HPS1Q92902 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HPS1Q92902 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HPS1Q92902 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HPS1Q92902 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HPS1Q92902 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HPS1Q92902 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HPS1Q92902 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
HPS1Q92902 AC026202.3-201ENST00000600805 1127 ntBASIC20.66■□□□□ 0.9
HPS1Q92902 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HPS1Q92902 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HPS1Q92902 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HPS1Q92902 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HPS1Q92902 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.66■□□□□ 0.9
HPS1Q92902 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.66■□□□□ 0.9
HPS1Q92902 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HPS1Q92902 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HPS1Q92902 RNF165-205ENST00000588679 2904 ntBASIC20.65■□□□□ 0.9
HPS1Q92902 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HPS1Q92902 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HPS1Q92902 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HPS1Q92902 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HPS1Q92902 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HPS1Q92902 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HPS1Q92902 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.65■□□□□ 0.9
HPS1Q92902 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.65■□□□□ 0.9
HPS1Q92902 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HPS1Q92902 AC233723.2-201ENST00000623798 2106 ntBASIC20.65■□□□□ 0.9
HPS1Q92902 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
HPS1Q92902 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms