Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.02■□□□□ 0.96
TRUB1Q8WWH5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRUB1Q8WWH5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRUB1Q8WWH5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
TRUB1Q8WWH5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRUB1Q8WWH5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRUB1Q8WWH5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.01■□□□□ 0.95
TRUB1Q8WWH5 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRUB1Q8WWH5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRUB1Q8WWH5 ZNRF2P2-203ENST00000454624 420 ntBASIC21.01■□□□□ 0.95
TRUB1Q8WWH5 CR559946.2-201ENST00000623684 991 ntBASIC21.01■□□□□ 0.95
TRUB1Q8WWH5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRUB1Q8WWH5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRUB1Q8WWH5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRUB1Q8WWH5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRUB1Q8WWH5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.01■□□□□ 0.95
TRUB1Q8WWH5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.01■□□□□ 0.95
TRUB1Q8WWH5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB1Q8WWH5 AC127496.7-201ENST00000625110 1798 ntBASIC21■□□□□ 0.95
TRUB1Q8WWH5 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB1Q8WWH5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB1Q8WWH5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21■□□□□ 0.95
TRUB1Q8WWH5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB1Q8WWH5 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRUB1Q8WWH5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB1Q8WWH5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB1Q8WWH5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB1Q8WWH5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB1Q8WWH5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21■□□□□ 0.95
TRUB1Q8WWH5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TRUB1Q8WWH5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRUB1Q8WWH5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRUB1Q8WWH5 AC007375.3-201ENST00000600936 2314 ntBASIC20.99■□□□□ 0.95
TRUB1Q8WWH5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRUB1Q8WWH5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.99■□□□□ 0.95
TRUB1Q8WWH5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRUB1Q8WWH5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRUB1Q8WWH5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.99■□□□□ 0.95
TRUB1Q8WWH5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRUB1Q8WWH5 SMPD5-203ENST00000639008 1464 ntBASIC20.99■□□□□ 0.95
TRUB1Q8WWH5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.99■□□□□ 0.95
TRUB1Q8WWH5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRUB1Q8WWH5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.99■□□□□ 0.95
TRUB1Q8WWH5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRUB1Q8WWH5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRUB1Q8WWH5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRUB1Q8WWH5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRUB1Q8WWH5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRUB1Q8WWH5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.98■□□□□ 0.95
TRUB1Q8WWH5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.98■□□□□ 0.95
TRUB1Q8WWH5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRUB1Q8WWH5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRUB1Q8WWH5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.98■□□□□ 0.95
TRUB1Q8WWH5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRUB1Q8WWH5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRUB1Q8WWH5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TRUB1Q8WWH5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRUB1Q8WWH5 LINC00526-201ENST00000581067 1875 ntBASIC20.97■□□□□ 0.95
TRUB1Q8WWH5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRUB1Q8WWH5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.97■□□□□ 0.95
TRUB1Q8WWH5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
TRUB1Q8WWH5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRUB1Q8WWH5 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRUB1Q8WWH5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.97■□□□□ 0.95
TRUB1Q8WWH5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.97■□□□□ 0.95
TRUB1Q8WWH5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRUB1Q8WWH5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRUB1Q8WWH5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRUB1Q8WWH5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRUB1Q8WWH5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRUB1Q8WWH5 KRT18P10-201ENST00000388836 1287 ntBASIC20.96■□□□□ 0.95
TRUB1Q8WWH5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRUB1Q8WWH5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRUB1Q8WWH5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRUB1Q8WWH5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.95■□□□□ 0.94
TRUB1Q8WWH5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.95■□□□□ 0.94
TRUB1Q8WWH5 FOXO3B-201ENST00000395675 1928 ntBASIC20.95■□□□□ 0.94
TRUB1Q8WWH5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRUB1Q8WWH5 AL121603.2-201ENST00000557373 2117 ntBASIC20.95■□□□□ 0.94
TRUB1Q8WWH5 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.95■□□□□ 0.94
TRUB1Q8WWH5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRUB1Q8WWH5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRUB1Q8WWH5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRUB1Q8WWH5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
TRUB1Q8WWH5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.94■□□□□ 0.94
TRUB1Q8WWH5 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRUB1Q8WWH5 RPS2P35-201ENST00000443417 897 ntBASIC20.94■□□□□ 0.94
TRUB1Q8WWH5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.94■□□□□ 0.94
TRUB1Q8WWH5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRUB1Q8WWH5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB1Q8WWH5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB1Q8WWH5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB1Q8WWH5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB1Q8WWH5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB1Q8WWH5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.93■□□□□ 0.94
TRUB1Q8WWH5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
TRUB1Q8WWH5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB1Q8WWH5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB1Q8WWH5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB1Q8WWH5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms