Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
STAG1Q8WVM7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
STAG1Q8WVM7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
STAG1Q8WVM7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
STAG1Q8WVM7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.26■■□□□ 1.95
STAG1Q8WVM7 TSPY9P-201ENST00000440215 945 ntBASIC27.26■■□□□ 1.95
STAG1Q8WVM7 TSPY11P-201ENST00000442607 1045 ntBASIC27.26■■□□□ 1.95
STAG1Q8WVM7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.26■■□□□ 1.95
STAG1Q8WVM7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
STAG1Q8WVM7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
STAG1Q8WVM7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
STAG1Q8WVM7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.26■■□□□ 1.95
STAG1Q8WVM7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
STAG1Q8WVM7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC27.25■■□□□ 1.95
STAG1Q8WVM7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
STAG1Q8WVM7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
STAG1Q8WVM7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC27.25■■□□□ 1.95
STAG1Q8WVM7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC27.25■■□□□ 1.95
STAG1Q8WVM7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
STAG1Q8WVM7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
STAG1Q8WVM7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
STAG1Q8WVM7 LINC01124-201ENST00000409786 2117 ntBASIC27.24■■□□□ 1.95
STAG1Q8WVM7 KRT16P3-201ENST00000439127 1283 ntBASIC27.24■■□□□ 1.95
STAG1Q8WVM7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
STAG1Q8WVM7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
STAG1Q8WVM7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC27.23■■□□□ 1.95
STAG1Q8WVM7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
STAG1Q8WVM7 LINC00543-201ENST00000567234 1845 ntBASIC27.23■■□□□ 1.95
STAG1Q8WVM7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
STAG1Q8WVM7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
STAG1Q8WVM7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
STAG1Q8WVM7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.23■■□□□ 1.95
STAG1Q8WVM7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.23■■□□□ 1.95
STAG1Q8WVM7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
STAG1Q8WVM7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
STAG1Q8WVM7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
STAG1Q8WVM7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC27.23■■□□□ 1.95
STAG1Q8WVM7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
STAG1Q8WVM7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
STAG1Q8WVM7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
STAG1Q8WVM7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
STAG1Q8WVM7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
STAG1Q8WVM7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC27.22■■□□□ 1.95
STAG1Q8WVM7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC27.22■■□□□ 1.95
STAG1Q8WVM7 AC141586.4-201ENST00000624558 1573 ntBASIC27.22■■□□□ 1.95
STAG1Q8WVM7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
STAG1Q8WVM7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
STAG1Q8WVM7 MTDHP2-201ENST00000601468 714 ntBASIC27.21■■□□□ 1.95
STAG1Q8WVM7 MIR6722-201ENST00000617286 78 ntBASIC27.21■■□□□ 1.95
STAG1Q8WVM7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.21■■□□□ 1.95
STAG1Q8WVM7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
STAG1Q8WVM7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
STAG1Q8WVM7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.2■■□□□ 1.94
STAG1Q8WVM7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.2■■□□□ 1.94
STAG1Q8WVM7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.94
STAG1Q8WVM7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
STAG1Q8WVM7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
STAG1Q8WVM7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
STAG1Q8WVM7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC27.19■■□□□ 1.94
STAG1Q8WVM7 AC010997.5-201ENST00000609182 354 ntBASIC27.19■■□□□ 1.94
STAG1Q8WVM7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
STAG1Q8WVM7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
STAG1Q8WVM7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
STAG1Q8WVM7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.18■■□□□ 1.94
STAG1Q8WVM7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC27.18■■□□□ 1.94
STAG1Q8WVM7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
STAG1Q8WVM7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
STAG1Q8WVM7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC27.18■■□□□ 1.94
STAG1Q8WVM7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC27.18■■□□□ 1.94
STAG1Q8WVM7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
STAG1Q8WVM7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.18■■□□□ 1.94
STAG1Q8WVM7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
STAG1Q8WVM7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
STAG1Q8WVM7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
STAG1Q8WVM7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC27.17■■□□□ 1.94
STAG1Q8WVM7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.17■■□□□ 1.94
STAG1Q8WVM7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.17■■□□□ 1.94
STAG1Q8WVM7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
STAG1Q8WVM7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.16■■□□□ 1.94
STAG1Q8WVM7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
STAG1Q8WVM7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
STAG1Q8WVM7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.16■■□□□ 1.94
STAG1Q8WVM7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.16■■□□□ 1.94
STAG1Q8WVM7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
STAG1Q8WVM7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
STAG1Q8WVM7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.15■■□□□ 1.94
STAG1Q8WVM7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
STAG1Q8WVM7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC27.14■■□□□ 1.94
STAG1Q8WVM7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
STAG1Q8WVM7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.14■■□□□ 1.94
STAG1Q8WVM7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
STAG1Q8WVM7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
STAG1Q8WVM7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC27.14■■□□□ 1.94
STAG1Q8WVM7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
STAG1Q8WVM7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC27.14■■□□□ 1.93
STAG1Q8WVM7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.13■■□□□ 1.93
STAG1Q8WVM7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
STAG1Q8WVM7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27.13■■□□□ 1.93
STAG1Q8WVM7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
STAG1Q8WVM7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms