Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCHCR1Q8TD31 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.86■■□□□ 1.41
CCHCR1Q8TD31 AC074183.2-201ENST00000623112 922 ntBASIC23.86■■□□□ 1.41
CCHCR1Q8TD31 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCHCR1Q8TD31 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCHCR1Q8TD31 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.86■■□□□ 1.41
CCHCR1Q8TD31 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCHCR1Q8TD31 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCHCR1Q8TD31 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCHCR1Q8TD31 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
CCHCR1Q8TD31 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCHCR1Q8TD31 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.85■■□□□ 1.41
CCHCR1Q8TD31 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.85■■□□□ 1.41
CCHCR1Q8TD31 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CCHCR1Q8TD31 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCHCR1Q8TD31 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CCHCR1Q8TD31 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.84■■□□□ 1.41
CCHCR1Q8TD31 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCHCR1Q8TD31 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCHCR1Q8TD31 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCHCR1Q8TD31 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCHCR1Q8TD31 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCHCR1Q8TD31 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCHCR1Q8TD31 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CCHCR1Q8TD31 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCHCR1Q8TD31 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.84■■□□□ 1.41
CCHCR1Q8TD31 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCHCR1Q8TD31 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.84■■□□□ 1.41
CCHCR1Q8TD31 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCHCR1Q8TD31 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCHCR1Q8TD31 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.83■■□□□ 1.41
CCHCR1Q8TD31 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CCHCR1Q8TD31 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
CCHCR1Q8TD31 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CCHCR1Q8TD31 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CCHCR1Q8TD31 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCHCR1Q8TD31 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCHCR1Q8TD31 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCHCR1Q8TD31 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.82■■□□□ 1.4
CCHCR1Q8TD31 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCHCR1Q8TD31 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCHCR1Q8TD31 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCHCR1Q8TD31 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.81■■□□□ 1.4
CCHCR1Q8TD31 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCHCR1Q8TD31 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CCHCR1Q8TD31 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCHCR1Q8TD31 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.81■■□□□ 1.4
CCHCR1Q8TD31 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCHCR1Q8TD31 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCHCR1Q8TD31 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCHCR1Q8TD31 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCHCR1Q8TD31 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.8■■□□□ 1.4
CCHCR1Q8TD31 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCHCR1Q8TD31 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CCHCR1Q8TD31 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CCHCR1Q8TD31 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.8■■□□□ 1.4
CCHCR1Q8TD31 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CCHCR1Q8TD31 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCHCR1Q8TD31 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCHCR1Q8TD31 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCHCR1Q8TD31 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCHCR1Q8TD31 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCHCR1Q8TD31 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCHCR1Q8TD31 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CCHCR1Q8TD31 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCHCR1Q8TD31 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.79■■□□□ 1.4
CCHCR1Q8TD31 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCHCR1Q8TD31 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCHCR1Q8TD31 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCHCR1Q8TD31 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCHCR1Q8TD31 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.78■■□□□ 1.4
CCHCR1Q8TD31 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCHCR1Q8TD31 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCHCR1Q8TD31 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CCHCR1Q8TD31 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCHCR1Q8TD31 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCHCR1Q8TD31 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCHCR1Q8TD31 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CCHCR1Q8TD31 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.77■■□□□ 1.4
CCHCR1Q8TD31 LONRF2P2-201ENST00000439212 571 ntBASIC23.77■■□□□ 1.4
CCHCR1Q8TD31 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.77■■□□□ 1.4
CCHCR1Q8TD31 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCHCR1Q8TD31 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCHCR1Q8TD31 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCHCR1Q8TD31 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCHCR1Q8TD31 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCHCR1Q8TD31 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.77■■□□□ 1.4
CCHCR1Q8TD31 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCHCR1Q8TD31 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCHCR1Q8TD31 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCHCR1Q8TD31 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.76■■□□□ 1.39
CCHCR1Q8TD31 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCHCR1Q8TD31 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCHCR1Q8TD31 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CCHCR1Q8TD31 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.76■■□□□ 1.39
CCHCR1Q8TD31 AC010980.1-201ENST00000587192 1142 ntBASIC23.76■■□□□ 1.39
CCHCR1Q8TD31 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.76■■□□□ 1.39
CCHCR1Q8TD31 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.76■■□□□ 1.39
CCHCR1Q8TD31 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCHCR1Q8TD31 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms