Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SVIPQ8NHG7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SVIPQ8NHG7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SVIPQ8NHG7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SVIPQ8NHG7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SVIPQ8NHG7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SVIPQ8NHG7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SVIPQ8NHG7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SVIPQ8NHG7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SVIPQ8NHG7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SVIPQ8NHG7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SVIPQ8NHG7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SVIPQ8NHG7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SVIPQ8NHG7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SVIPQ8NHG7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SVIPQ8NHG7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SVIPQ8NHG7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SVIPQ8NHG7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SVIPQ8NHG7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SVIPQ8NHG7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SVIPQ8NHG7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SVIPQ8NHG7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.62□□□□□ -0.07
SVIPQ8NHG7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SVIPQ8NHG7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.62□□□□□ -0.07
SVIPQ8NHG7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SVIPQ8NHG7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SVIPQ8NHG7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.62□□□□□ -0.07
SVIPQ8NHG7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SVIPQ8NHG7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SVIPQ8NHG7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SVIPQ8NHG7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SVIPQ8NHG7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC14.61□□□□□ -0.07
SVIPQ8NHG7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SVIPQ8NHG7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC14.61□□□□□ -0.07
SVIPQ8NHG7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.61□□□□□ -0.07
SVIPQ8NHG7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
SVIPQ8NHG7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SVIPQ8NHG7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC14.61□□□□□ -0.07
SVIPQ8NHG7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SVIPQ8NHG7 AL032819.2-201ENST00000624543 2162 ntBASIC14.61□□□□□ -0.07
SVIPQ8NHG7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SVIPQ8NHG7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SVIPQ8NHG7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SVIPQ8NHG7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SVIPQ8NHG7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
SVIPQ8NHG7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SVIPQ8NHG7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SVIPQ8NHG7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.6□□□□□ -0.07
SVIPQ8NHG7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SVIPQ8NHG7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SVIPQ8NHG7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC14.6□□□□□ -0.07
SVIPQ8NHG7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.59□□□□□ -0.07
SVIPQ8NHG7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SVIPQ8NHG7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SVIPQ8NHG7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SVIPQ8NHG7 AC004812.2-201ENST00000611079 2094 ntBASIC14.59□□□□□ -0.07
SVIPQ8NHG7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SVIPQ8NHG7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SVIPQ8NHG7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SVIPQ8NHG7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SVIPQ8NHG7 AC005082.1-201ENST00000413042 2259 ntBASIC14.59□□□□□ -0.07
SVIPQ8NHG7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SVIPQ8NHG7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.59□□□□□ -0.07
SVIPQ8NHG7 AC137767.1-201ENST00000602918 1920 ntBASIC14.58□□□□□ -0.07
SVIPQ8NHG7 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.58□□□□□ -0.07
SVIPQ8NHG7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.58□□□□□ -0.07
SVIPQ8NHG7 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SVIPQ8NHG7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
SVIPQ8NHG7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SVIPQ8NHG7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC14.58□□□□□ -0.08
SVIPQ8NHG7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
SVIPQ8NHG7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SVIPQ8NHG7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SVIPQ8NHG7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SVIPQ8NHG7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SVIPQ8NHG7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SVIPQ8NHG7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SVIPQ8NHG7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC14.57□□□□□ -0.08
SVIPQ8NHG7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SVIPQ8NHG7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SVIPQ8NHG7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SVIPQ8NHG7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms