Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEM116Q8NCL8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.09■□□□□ 0.49
TMEM116Q8NCL8 MIR6765-201ENST00000614092 87 ntBASIC18.09■□□□□ 0.49
TMEM116Q8NCL8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM116Q8NCL8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM116Q8NCL8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEM116Q8NCL8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM116Q8NCL8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM116Q8NCL8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEM116Q8NCL8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TMEM116Q8NCL8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TMEM116Q8NCL8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM116Q8NCL8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TMEM116Q8NCL8 KRT18P60-201ENST00000312876 1297 ntBASIC18.08■□□□□ 0.48
TMEM116Q8NCL8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM116Q8NCL8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TMEM116Q8NCL8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM116Q8NCL8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TMEM116Q8NCL8 AC087393.1-201ENST00000582896 145 ntBASIC18.08■□□□□ 0.48
TMEM116Q8NCL8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM116Q8NCL8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM116Q8NCL8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM116Q8NCL8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM116Q8NCL8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TMEM116Q8NCL8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.07■□□□□ 0.48
TMEM116Q8NCL8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.07■□□□□ 0.48
TMEM116Q8NCL8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM116Q8NCL8 AL592295.1-201ENST00000400984 884 ntBASIC18.07■□□□□ 0.48
TMEM116Q8NCL8 DUX4L9-201ENST00000449051 1259 ntBASIC18.07■□□□□ 0.48
TMEM116Q8NCL8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM116Q8NCL8 SPCS2P3-201ENST00000500401 656 ntBASIC18.07■□□□□ 0.48
TMEM116Q8NCL8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.07■□□□□ 0.48
TMEM116Q8NCL8 AC129492.7-201ENST00000622992 756 ntBASIC18.07■□□□□ 0.48
TMEM116Q8NCL8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM116Q8NCL8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM116Q8NCL8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM116Q8NCL8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TMEM116Q8NCL8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM116Q8NCL8 AL161729.1-201ENST00000604104 1402 ntBASIC18.06■□□□□ 0.48
TMEM116Q8NCL8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM116Q8NCL8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM116Q8NCL8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM116Q8NCL8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM116Q8NCL8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM116Q8NCL8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM116Q8NCL8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM116Q8NCL8 AC133561.1-201ENST00000568600 2415 ntBASIC18.06■□□□□ 0.48
TMEM116Q8NCL8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 AC068473.5-201ENST00000616428 2072 ntBASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TMEM116Q8NCL8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
TMEM116Q8NCL8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM116Q8NCL8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
TMEM116Q8NCL8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM116Q8NCL8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM116Q8NCL8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM116Q8NCL8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.03■□□□□ 0.48
TMEM116Q8NCL8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
TMEM116Q8NCL8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.03■□□□□ 0.48
TMEM116Q8NCL8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM116Q8NCL8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM116Q8NCL8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms