Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAB42Q8N4Z0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAB42Q8N4Z0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAB42Q8N4Z0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.33■■□□□ 1.17
RAB42Q8N4Z0 AC004448.1-201ENST00000458332 883 ntBASIC22.33■■□□□ 1.17
RAB42Q8N4Z0 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.33■■□□□ 1.17
RAB42Q8N4Z0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
RAB42Q8N4Z0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
RAB42Q8N4Z0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAB42Q8N4Z0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RAB42Q8N4Z0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RAB42Q8N4Z0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAB42Q8N4Z0 LINC00543-201ENST00000567234 1845 ntBASIC22.32■■□□□ 1.16
RAB42Q8N4Z0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAB42Q8N4Z0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.32■■□□□ 1.16
RAB42Q8N4Z0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
RAB42Q8N4Z0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.32■■□□□ 1.16
RAB42Q8N4Z0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAB42Q8N4Z0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
RAB42Q8N4Z0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAB42Q8N4Z0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RAB42Q8N4Z0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.32■■□□□ 1.16
RAB42Q8N4Z0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.32■■□□□ 1.16
RAB42Q8N4Z0 AC131274.2-201ENST00000580697 1507 ntBASIC22.31■■□□□ 1.16
RAB42Q8N4Z0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RAB42Q8N4Z0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.31■■□□□ 1.16
RAB42Q8N4Z0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RAB42Q8N4Z0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAB42Q8N4Z0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAB42Q8N4Z0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.31■■□□□ 1.16
RAB42Q8N4Z0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAB42Q8N4Z0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
RAB42Q8N4Z0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAB42Q8N4Z0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RAB42Q8N4Z0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.3■■□□□ 1.16
RAB42Q8N4Z0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
RAB42Q8N4Z0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RAB42Q8N4Z0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RAB42Q8N4Z0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAB42Q8N4Z0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RAB42Q8N4Z0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
RAB42Q8N4Z0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.3■■□□□ 1.16
RAB42Q8N4Z0 MTDHP2-201ENST00000601468 714 ntBASIC22.3■■□□□ 1.16
RAB42Q8N4Z0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.3■■□□□ 1.16
RAB42Q8N4Z0 SNX5-217ENST00000606557 1087 ntBASIC22.3■■□□□ 1.16
RAB42Q8N4Z0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
RAB42Q8N4Z0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAB42Q8N4Z0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAB42Q8N4Z0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.3■■□□□ 1.16
RAB42Q8N4Z0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 AC135731.1-201ENST00000569415 2548 ntBASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.29■■□□□ 1.16
RAB42Q8N4Z0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
RAB42Q8N4Z0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.28■■□□□ 1.16
RAB42Q8N4Z0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAB42Q8N4Z0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
RAB42Q8N4Z0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
RAB42Q8N4Z0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAB42Q8N4Z0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.28■■□□□ 1.16
RAB42Q8N4Z0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.28■■□□□ 1.16
RAB42Q8N4Z0 TSPY9P-201ENST00000440215 945 ntBASIC22.28■■□□□ 1.16
RAB42Q8N4Z0 TSPY11P-201ENST00000442607 1045 ntBASIC22.28■■□□□ 1.16
RAB42Q8N4Z0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.28■■□□□ 1.16
RAB42Q8N4Z0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.28■■□□□ 1.16
RAB42Q8N4Z0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
RAB42Q8N4Z0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAB42Q8N4Z0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.27■■□□□ 1.16
RAB42Q8N4Z0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAB42Q8N4Z0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAB42Q8N4Z0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAB42Q8N4Z0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAB42Q8N4Z0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAB42Q8N4Z0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.27■■□□□ 1.16
RAB42Q8N4Z0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.27■■□□□ 1.16
RAB42Q8N4Z0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAB42Q8N4Z0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAB42Q8N4Z0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAB42Q8N4Z0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
RAB42Q8N4Z0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
RAB42Q8N4Z0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAB42Q8N4Z0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RAB42Q8N4Z0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAB42Q8N4Z0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAB42Q8N4Z0 GUSBP5-201ENST00000418136 578 ntBASIC22.26■■□□□ 1.15
RAB42Q8N4Z0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms