Protein–RNA interactions for Protein: Q8N135

LGI4, Leucine-rich repeat LGI family member 4, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI4Q8N135 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LGI4Q8N135 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LGI4Q8N135 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LGI4Q8N135 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LGI4Q8N135 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
LGI4Q8N135 AC239859.2-201ENST00000444165 318 ntBASIC21.83■■□□□ 1.09
LGI4Q8N135 KRT125P-201ENST00000546827 989 ntBASIC21.83■■□□□ 1.09
LGI4Q8N135 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.83■■□□□ 1.09
LGI4Q8N135 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LGI4Q8N135 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
LGI4Q8N135 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.82■■□□□ 1.08
LGI4Q8N135 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LGI4Q8N135 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LGI4Q8N135 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LGI4Q8N135 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LGI4Q8N135 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.82■■□□□ 1.08
LGI4Q8N135 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LGI4Q8N135 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LGI4Q8N135 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LGI4Q8N135 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.82■■□□□ 1.08
LGI4Q8N135 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LGI4Q8N135 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LGI4Q8N135 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.82■■□□□ 1.08
LGI4Q8N135 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LGI4Q8N135 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LGI4Q8N135 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LGI4Q8N135 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.81■■□□□ 1.08
LGI4Q8N135 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LGI4Q8N135 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LGI4Q8N135 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LGI4Q8N135 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
LGI4Q8N135 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LGI4Q8N135 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.8■■□□□ 1.08
LGI4Q8N135 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LGI4Q8N135 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LGI4Q8N135 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
LGI4Q8N135 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.8■■□□□ 1.08
LGI4Q8N135 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.8■■□□□ 1.08
LGI4Q8N135 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LGI4Q8N135 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.8■■□□□ 1.08
LGI4Q8N135 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
LGI4Q8N135 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LGI4Q8N135 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LGI4Q8N135 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LGI4Q8N135 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LGI4Q8N135 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LGI4Q8N135 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LGI4Q8N135 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
LGI4Q8N135 MIR4281-201ENST00000580852 62 ntBASIC21.79■■□□□ 1.08
LGI4Q8N135 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.79■■□□□ 1.08
LGI4Q8N135 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
LGI4Q8N135 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.79■■□□□ 1.08
LGI4Q8N135 AC133561.1-201ENST00000568600 2415 ntBASIC21.79■■□□□ 1.08
LGI4Q8N135 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.79■■□□□ 1.08
LGI4Q8N135 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LGI4Q8N135 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LGI4Q8N135 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
LGI4Q8N135 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LGI4Q8N135 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LGI4Q8N135 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LGI4Q8N135 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LGI4Q8N135 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.78■■□□□ 1.08
LGI4Q8N135 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.78■■□□□ 1.08
LGI4Q8N135 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
LGI4Q8N135 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.78■■□□□ 1.08
LGI4Q8N135 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LGI4Q8N135 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LGI4Q8N135 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.77■■□□□ 1.08
LGI4Q8N135 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LGI4Q8N135 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.77■■□□□ 1.08
LGI4Q8N135 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LGI4Q8N135 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LGI4Q8N135 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LGI4Q8N135 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.77■■□□□ 1.08
LGI4Q8N135 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LGI4Q8N135 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LGI4Q8N135 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LGI4Q8N135 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LGI4Q8N135 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.77■■□□□ 1.07
LGI4Q8N135 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LGI4Q8N135 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LGI4Q8N135 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
LGI4Q8N135 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LGI4Q8N135 AC021242.3-201ENST00000607598 1377 ntBASIC21.76■■□□□ 1.07
LGI4Q8N135 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LGI4Q8N135 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LGI4Q8N135 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LGI4Q8N135 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.76■■□□□ 1.07
LGI4Q8N135 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.76■■□□□ 1.07
LGI4Q8N135 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LGI4Q8N135 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LGI4Q8N135 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LGI4Q8N135 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LGI4Q8N135 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LGI4Q8N135 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LGI4Q8N135 HLA-L-211ENST00000482052 1765 ntBASIC21.75■■□□□ 1.07
LGI4Q8N135 MIR4787-201ENST00000607364 84 ntBASIC21.75■■□□□ 1.07
LGI4Q8N135 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.75■■□□□ 1.07
LGI4Q8N135 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LGI4Q8N135 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms