Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
DDX60Q8IY21 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC28.77■■■□□ 2.2
DDX60Q8IY21 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC28.77■■■□□ 2.2
DDX60Q8IY21 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
DDX60Q8IY21 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
DDX60Q8IY21 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
DDX60Q8IY21 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
DDX60Q8IY21 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC28.75■■■□□ 2.19
DDX60Q8IY21 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.75■■■□□ 2.19
DDX60Q8IY21 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
DDX60Q8IY21 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
DDX60Q8IY21 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC28.75■■■□□ 2.19
DDX60Q8IY21 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
DDX60Q8IY21 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
DDX60Q8IY21 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC28.75■■■□□ 2.19
DDX60Q8IY21 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
DDX60Q8IY21 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
DDX60Q8IY21 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
DDX60Q8IY21 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
DDX60Q8IY21 PTMA-205ENST00000410064 814 ntTSL 2 BASIC28.74■■■□□ 2.19
DDX60Q8IY21 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
DDX60Q8IY21 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
DDX60Q8IY21 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
DDX60Q8IY21 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.74■■■□□ 2.19
DDX60Q8IY21 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
DDX60Q8IY21 EBPL-204ENST00000378272 766 ntTSL 3 BASIC28.73■■■□□ 2.19
DDX60Q8IY21 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
DDX60Q8IY21 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
DDX60Q8IY21 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
DDX60Q8IY21 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
DDX60Q8IY21 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.73■■■□□ 2.19
DDX60Q8IY21 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
DDX60Q8IY21 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
DDX60Q8IY21 SRD5A1P1-201ENST00000442297 786 ntBASIC28.72■■■□□ 2.19
DDX60Q8IY21 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC28.72■■■□□ 2.19
DDX60Q8IY21 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC28.72■■■□□ 2.19
DDX60Q8IY21 AC145676.1-201ENST00000514988 2004 ntBASIC28.72■■■□□ 2.19
DDX60Q8IY21 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
DDX60Q8IY21 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
DDX60Q8IY21 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.72■■■□□ 2.19
DDX60Q8IY21 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
DDX60Q8IY21 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
DDX60Q8IY21 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
DDX60Q8IY21 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
DDX60Q8IY21 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC28.72■■■□□ 2.19
DDX60Q8IY21 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
DDX60Q8IY21 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
DDX60Q8IY21 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC28.71■■■□□ 2.19
DDX60Q8IY21 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
DDX60Q8IY21 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
DDX60Q8IY21 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC28.71■■■□□ 2.19
DDX60Q8IY21 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
DDX60Q8IY21 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC28.71■■■□□ 2.19
DDX60Q8IY21 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC28.71■■■□□ 2.19
DDX60Q8IY21 AP001330.3-201ENST00000520123 633 ntBASIC28.71■■■□□ 2.19
DDX60Q8IY21 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
DDX60Q8IY21 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.19
DDX60Q8IY21 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC28.7■■■□□ 2.19
DDX60Q8IY21 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
DDX60Q8IY21 PTCHD3P2-201ENST00000424937 1205 ntBASIC28.7■■■□□ 2.19
DDX60Q8IY21 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC28.7■■■□□ 2.19
DDX60Q8IY21 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.7■■■□□ 2.18
DDX60Q8IY21 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
DDX60Q8IY21 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC28.69■■■□□ 2.18
DDX60Q8IY21 AC142381.2-201ENST00000566120 298 ntBASIC28.69■■■□□ 2.18
DDX60Q8IY21 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC28.69■■■□□ 2.18
DDX60Q8IY21 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
DDX60Q8IY21 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
DDX60Q8IY21 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
DDX60Q8IY21 LGR4-203ENST00000480977 492 ntTSL 2 BASIC28.68■■■□□ 2.18
DDX60Q8IY21 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC28.68■■■□□ 2.18
DDX60Q8IY21 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
DDX60Q8IY21 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
DDX60Q8IY21 C17orf82-201ENST00000623772 1530 ntBASIC28.67■■■□□ 2.18
DDX60Q8IY21 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.67■■■□□ 2.18
DDX60Q8IY21 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
DDX60Q8IY21 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC28.67■■■□□ 2.18
DDX60Q8IY21 EDA-201ENST00000338901 1233 ntBASIC28.67■■■□□ 2.18
DDX60Q8IY21 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC28.67■■■□□ 2.18
DDX60Q8IY21 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
DDX60Q8IY21 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
DDX60Q8IY21 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC28.66■■■□□ 2.18
DDX60Q8IY21 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
DDX60Q8IY21 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
DDX60Q8IY21 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.66■■■□□ 2.18
DDX60Q8IY21 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
DDX60Q8IY21 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
DDX60Q8IY21 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.65■■■□□ 2.18
DDX60Q8IY21 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
DDX60Q8IY21 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
DDX60Q8IY21 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
DDX60Q8IY21 AC026271.2-201ENST00000428091 497 ntBASIC28.65■■■□□ 2.18
DDX60Q8IY21 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
DDX60Q8IY21 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
DDX60Q8IY21 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC28.64■■■□□ 2.18
DDX60Q8IY21 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC28.64■■■□□ 2.18
DDX60Q8IY21 REST-206ENST00000612429 1376 ntTSL 5 BASIC28.64■■■□□ 2.18
DDX60Q8IY21 REST-207ENST00000616975 1370 ntTSL 5 BASIC28.64■■■□□ 2.18
DDX60Q8IY21 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
DDX60Q8IY21 MIR939-201ENST00000401314 82 ntBASIC28.64■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms