Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP3Q8IVE0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP3Q8IVE0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CROCCP3Q8IVE0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.78■□□□□ 0.92
CROCCP3Q8IVE0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CROCCP3Q8IVE0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.78■□□□□ 0.92
CROCCP3Q8IVE0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CROCCP3Q8IVE0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
CROCCP3Q8IVE0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CROCCP3Q8IVE0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CROCCP3Q8IVE0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CROCCP3Q8IVE0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.78■□□□□ 0.92
CROCCP3Q8IVE0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CROCCP3Q8IVE0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CROCCP3Q8IVE0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CROCCP3Q8IVE0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CROCCP3Q8IVE0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.77■□□□□ 0.92
CROCCP3Q8IVE0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CROCCP3Q8IVE0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.77■□□□□ 0.92
CROCCP3Q8IVE0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CROCCP3Q8IVE0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CROCCP3Q8IVE0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CROCCP3Q8IVE0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CROCCP3Q8IVE0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.77■□□□□ 0.91
CROCCP3Q8IVE0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CROCCP3Q8IVE0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.76■□□□□ 0.91
CROCCP3Q8IVE0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.76■□□□□ 0.91
CROCCP3Q8IVE0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CROCCP3Q8IVE0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CROCCP3Q8IVE0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CROCCP3Q8IVE0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.76■□□□□ 0.91
CROCCP3Q8IVE0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
CROCCP3Q8IVE0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CROCCP3Q8IVE0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CROCCP3Q8IVE0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CROCCP3Q8IVE0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CROCCP3Q8IVE0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CROCCP3Q8IVE0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CROCCP3Q8IVE0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.75■□□□□ 0.91
CROCCP3Q8IVE0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.75■□□□□ 0.91
CROCCP3Q8IVE0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.75■□□□□ 0.91
CROCCP3Q8IVE0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.75■□□□□ 0.91
CROCCP3Q8IVE0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CROCCP3Q8IVE0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.75■□□□□ 0.91
CROCCP3Q8IVE0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CROCCP3Q8IVE0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CROCCP3Q8IVE0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CROCCP3Q8IVE0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CROCCP3Q8IVE0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CROCCP3Q8IVE0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CROCCP3Q8IVE0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CROCCP3Q8IVE0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CROCCP3Q8IVE0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CROCCP3Q8IVE0 SLC6A10P-202ENST00000431994 2058 ntBASIC20.74■□□□□ 0.91
CROCCP3Q8IVE0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CROCCP3Q8IVE0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CROCCP3Q8IVE0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CROCCP3Q8IVE0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CROCCP3Q8IVE0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CROCCP3Q8IVE0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CROCCP3Q8IVE0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CROCCP3Q8IVE0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CROCCP3Q8IVE0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.73■□□□□ 0.91
CROCCP3Q8IVE0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CROCCP3Q8IVE0 SUZ12P1-203ENST00000578195 985 ntBASIC20.73■□□□□ 0.91
CROCCP3Q8IVE0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CROCCP3Q8IVE0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.73■□□□□ 0.91
CROCCP3Q8IVE0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CROCCP3Q8IVE0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CROCCP3Q8IVE0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CROCCP3Q8IVE0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
CROCCP3Q8IVE0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CROCCP3Q8IVE0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CROCCP3Q8IVE0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CROCCP3Q8IVE0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CROCCP3Q8IVE0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.72■□□□□ 0.91
CROCCP3Q8IVE0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CROCCP3Q8IVE0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.72■□□□□ 0.91
CROCCP3Q8IVE0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CROCCP3Q8IVE0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CROCCP3Q8IVE0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CROCCP3Q8IVE0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CROCCP3Q8IVE0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.71■□□□□ 0.91
CROCCP3Q8IVE0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CROCCP3Q8IVE0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CROCCP3Q8IVE0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CROCCP3Q8IVE0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CROCCP3Q8IVE0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CROCCP3Q8IVE0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.71■□□□□ 0.91
CROCCP3Q8IVE0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
CROCCP3Q8IVE0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CROCCP3Q8IVE0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CROCCP3Q8IVE0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CROCCP3Q8IVE0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CROCCP3Q8IVE0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CROCCP3Q8IVE0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CROCCP3Q8IVE0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CROCCP3Q8IVE0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CROCCP3Q8IVE0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CROCCP3Q8IVE0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms