Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
VRK2Q86Y07 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VRK2Q86Y07 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
VRK2Q86Y07 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.25■□□□□ 0.99
VRK2Q86Y07 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.25■□□□□ 0.99
VRK2Q86Y07 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.25■□□□□ 0.99
VRK2Q86Y07 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VRK2Q86Y07 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VRK2Q86Y07 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VRK2Q86Y07 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
VRK2Q86Y07 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VRK2Q86Y07 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
VRK2Q86Y07 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.24■□□□□ 0.99
VRK2Q86Y07 AC011551.1-201ENST00000614101 683 ntBASIC21.24■□□□□ 0.99
VRK2Q86Y07 PVT1_1.1-201ENST00000615125 194 ntBASIC21.24■□□□□ 0.99
VRK2Q86Y07 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VRK2Q86Y07 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VRK2Q86Y07 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VRK2Q86Y07 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VRK2Q86Y07 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
VRK2Q86Y07 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.24■□□□□ 0.99
VRK2Q86Y07 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VRK2Q86Y07 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VRK2Q86Y07 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
VRK2Q86Y07 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VRK2Q86Y07 TSPY13P-201ENST00000338964 914 ntBASIC21.23■□□□□ 0.99
VRK2Q86Y07 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
VRK2Q86Y07 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VRK2Q86Y07 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VRK2Q86Y07 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
VRK2Q86Y07 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VRK2Q86Y07 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VRK2Q86Y07 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VRK2Q86Y07 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VRK2Q86Y07 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VRK2Q86Y07 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.22■□□□□ 0.99
VRK2Q86Y07 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.22■□□□□ 0.99
VRK2Q86Y07 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VRK2Q86Y07 AC022616.5-201ENST00000518796 181 ntBASIC21.22■□□□□ 0.99
VRK2Q86Y07 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.22■□□□□ 0.99
VRK2Q86Y07 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.22■□□□□ 0.99
VRK2Q86Y07 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VRK2Q86Y07 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
VRK2Q86Y07 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VRK2Q86Y07 AC010980.1-201ENST00000587192 1142 ntBASIC21.21■□□□□ 0.99
VRK2Q86Y07 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.21■□□□□ 0.99
VRK2Q86Y07 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
VRK2Q86Y07 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VRK2Q86Y07 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.21■□□□□ 0.99
VRK2Q86Y07 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VRK2Q86Y07 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
VRK2Q86Y07 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
VRK2Q86Y07 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.2■□□□□ 0.98
VRK2Q86Y07 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
VRK2Q86Y07 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
VRK2Q86Y07 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.2■□□□□ 0.98
VRK2Q86Y07 DUSP8P5-201ENST00000422884 1815 ntBASIC21.2■□□□□ 0.98
VRK2Q86Y07 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
VRK2Q86Y07 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.19■□□□□ 0.98
VRK2Q86Y07 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.19■□□□□ 0.98
VRK2Q86Y07 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.19■□□□□ 0.98
VRK2Q86Y07 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.19■□□□□ 0.98
VRK2Q86Y07 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VRK2Q86Y07 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VRK2Q86Y07 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VRK2Q86Y07 AC120024.1-201ENST00000562672 995 ntBASIC21.18■□□□□ 0.98
VRK2Q86Y07 AC074183.2-201ENST00000623112 922 ntBASIC21.18■□□□□ 0.98
VRK2Q86Y07 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
VRK2Q86Y07 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.18■□□□□ 0.98
VRK2Q86Y07 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
VRK2Q86Y07 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VRK2Q86Y07 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VRK2Q86Y07 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
VRK2Q86Y07 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.17■□□□□ 0.98
VRK2Q86Y07 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.17■□□□□ 0.98
VRK2Q86Y07 AC012354.3-201ENST00000623734 483 ntBASIC21.17■□□□□ 0.98
VRK2Q86Y07 AL161729.1-201ENST00000604104 1402 ntBASIC21.17■□□□□ 0.98
VRK2Q86Y07 AL022069.1-201ENST00000568025 1636 ntBASIC21.17■□□□□ 0.98
VRK2Q86Y07 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.17■□□□□ 0.98
VRK2Q86Y07 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
VRK2Q86Y07 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VRK2Q86Y07 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
VRK2Q86Y07 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.17■□□□□ 0.98
VRK2Q86Y07 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VRK2Q86Y07 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VRK2Q86Y07 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
VRK2Q86Y07 AC131274.2-201ENST00000580697 1507 ntBASIC21.16■□□□□ 0.98
VRK2Q86Y07 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
VRK2Q86Y07 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.16■□□□□ 0.98
VRK2Q86Y07 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.16■□□□□ 0.98
VRK2Q86Y07 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VRK2Q86Y07 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VRK2Q86Y07 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VRK2Q86Y07 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VRK2Q86Y07 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.16■□□□□ 0.98
VRK2Q86Y07 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
VRK2Q86Y07 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.15■□□□□ 0.98
VRK2Q86Y07 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VRK2Q86Y07 AC133561.1-201ENST00000568600 2415 ntBASIC21.15■□□□□ 0.98
VRK2Q86Y07 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms