Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.34■□□□□ 0.85
LRRC28Q86X40 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.34■□□□□ 0.85
LRRC28Q86X40 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LRRC28Q86X40 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.34■□□□□ 0.85
LRRC28Q86X40 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC28Q86X40 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC28Q86X40 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.34■□□□□ 0.85
LRRC28Q86X40 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC28Q86X40 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LRRC28Q86X40 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC28Q86X40 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
LRRC28Q86X40 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRC28Q86X40 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRC28Q86X40 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRC28Q86X40 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
LRRC28Q86X40 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRC28Q86X40 DUX4L9-201ENST00000449051 1259 ntBASIC20.33■□□□□ 0.85
LRRC28Q86X40 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.33■□□□□ 0.85
LRRC28Q86X40 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
LRRC28Q86X40 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LRRC28Q86X40 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRRC28Q86X40 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LRRC28Q86X40 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC28Q86X40 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
LRRC28Q86X40 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.32■□□□□ 0.84
LRRC28Q86X40 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC28Q86X40 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC28Q86X40 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC28Q86X40 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.31■□□□□ 0.84
LRRC28Q86X40 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRC28Q86X40 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LRRC28Q86X40 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC28Q86X40 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRC28Q86X40 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC28Q86X40 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.31■□□□□ 0.84
LRRC28Q86X40 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRC28Q86X40 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LRRC28Q86X40 SPCS2P3-201ENST00000500401 656 ntBASIC20.31■□□□□ 0.84
LRRC28Q86X40 DUX4L18-201ENST00000553347 1267 ntBASIC20.31■□□□□ 0.84
LRRC28Q86X40 AC018755.3-202ENST00000596210 929 ntBASIC20.31■□□□□ 0.84
LRRC28Q86X40 MIR6089-201ENST00000616698 64 ntBASIC20.31■□□□□ 0.84
LRRC28Q86X40 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LRRC28Q86X40 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC28Q86X40 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC28Q86X40 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LRRC28Q86X40 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC28Q86X40 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.3■□□□□ 0.84
LRRC28Q86X40 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC28Q86X40 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC28Q86X40 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC28Q86X40 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.3■□□□□ 0.84
LRRC28Q86X40 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC28Q86X40 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.3■□□□□ 0.84
LRRC28Q86X40 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC28Q86X40 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LRRC28Q86X40 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC28Q86X40 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC28Q86X40 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LRRC28Q86X40 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC28Q86X40 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LRRC28Q86X40 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC28Q86X40 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC28Q86X40 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC28Q86X40 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC28Q86X40 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC28Q86X40 AC233723.2-201ENST00000623798 2106 ntBASIC20.29■□□□□ 0.84
LRRC28Q86X40 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.29■□□□□ 0.84
LRRC28Q86X40 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC28Q86X40 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC28Q86X40 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC28Q86X40 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.29■□□□□ 0.84
LRRC28Q86X40 MIR6765-201ENST00000614092 87 ntBASIC20.29■□□□□ 0.84
LRRC28Q86X40 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC28Q86X40 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC28Q86X40 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.28■□□□□ 0.84
LRRC28Q86X40 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC28Q86X40 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LRRC28Q86X40 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC28Q86X40 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC28Q86X40 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC28Q86X40 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
LRRC28Q86X40 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC28Q86X40 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC28Q86X40 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRC28Q86X40 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC28Q86X40 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC28Q86X40 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRC28Q86X40 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LRRC28Q86X40 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC28Q86X40 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC28Q86X40 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC28Q86X40 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LRRC28Q86X40 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC28Q86X40 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC28Q86X40 LINC00565-201ENST00000562710 2331 ntBASIC20.26■□□□□ 0.83
LRRC28Q86X40 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.26■□□□□ 0.83
LRRC28Q86X40 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC28Q86X40 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC28Q86X40 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.26■□□□□ 0.83
LRRC28Q86X40 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms