Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.13■□□□□ 0.97
ZNF550Q7Z398 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
ZNF550Q7Z398 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF550Q7Z398 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF550Q7Z398 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF550Q7Z398 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ZNF550Q7Z398 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF550Q7Z398 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF550Q7Z398 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF550Q7Z398 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ZNF550Q7Z398 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.12■□□□□ 0.97
ZNF550Q7Z398 AC009299.2-201ENST00000482477 511 ntBASIC21.12■□□□□ 0.97
ZNF550Q7Z398 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.12■□□□□ 0.97
ZNF550Q7Z398 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ZNF550Q7Z398 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.11■□□□□ 0.97
ZNF550Q7Z398 ABCB10P4-201ENST00000566803 2184 ntBASIC21.11■□□□□ 0.97
ZNF550Q7Z398 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
ZNF550Q7Z398 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF550Q7Z398 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF550Q7Z398 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF550Q7Z398 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF550Q7Z398 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.1■□□□□ 0.97
ZNF550Q7Z398 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.1■□□□□ 0.97
ZNF550Q7Z398 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF550Q7Z398 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF550Q7Z398 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ZNF550Q7Z398 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ZNF550Q7Z398 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF550Q7Z398 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ZNF550Q7Z398 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF550Q7Z398 AL022069.1-201ENST00000568025 1636 ntBASIC21.09■□□□□ 0.97
ZNF550Q7Z398 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF550Q7Z398 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF550Q7Z398 AC120024.1-201ENST00000562672 995 ntBASIC21.09■□□□□ 0.97
ZNF550Q7Z398 AC103724.3-201ENST00000564481 992 ntBASIC21.09■□□□□ 0.97
ZNF550Q7Z398 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.09■□□□□ 0.97
ZNF550Q7Z398 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF550Q7Z398 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF550Q7Z398 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF550Q7Z398 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF550Q7Z398 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF550Q7Z398 KRT18P24-201ENST00000344739 1156 ntBASIC21.08■□□□□ 0.97
ZNF550Q7Z398 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF550Q7Z398 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF550Q7Z398 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF550Q7Z398 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.08■□□□□ 0.97
ZNF550Q7Z398 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ZNF550Q7Z398 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ZNF550Q7Z398 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF550Q7Z398 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF550Q7Z398 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF550Q7Z398 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF550Q7Z398 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF550Q7Z398 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF550Q7Z398 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
ZNF550Q7Z398 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.07■□□□□ 0.96
ZNF550Q7Z398 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF550Q7Z398 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF550Q7Z398 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF550Q7Z398 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF550Q7Z398 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.07■□□□□ 0.96
ZNF550Q7Z398 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF550Q7Z398 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF550Q7Z398 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ZNF550Q7Z398 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ZNF550Q7Z398 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.06■□□□□ 0.96
ZNF550Q7Z398 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.06■□□□□ 0.96
ZNF550Q7Z398 THA1P-201ENST00000590384 1145 ntBASIC21.06■□□□□ 0.96
ZNF550Q7Z398 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.06■□□□□ 0.96
ZNF550Q7Z398 AL031848.2-201ENST00000607670 837 ntBASIC21.06■□□□□ 0.96
ZNF550Q7Z398 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ZNF550Q7Z398 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ZNF550Q7Z398 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.06■□□□□ 0.96
ZNF550Q7Z398 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF550Q7Z398 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF550Q7Z398 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF550Q7Z398 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF550Q7Z398 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.05■□□□□ 0.96
ZNF550Q7Z398 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF550Q7Z398 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF550Q7Z398 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.05■□□□□ 0.96
ZNF550Q7Z398 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF550Q7Z398 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF550Q7Z398 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF550Q7Z398 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF550Q7Z398 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF550Q7Z398 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.04■□□□□ 0.96
ZNF550Q7Z398 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF550Q7Z398 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF550Q7Z398 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
ZNF550Q7Z398 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF550Q7Z398 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF550Q7Z398 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF550Q7Z398 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF550Q7Z398 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF550Q7Z398 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ZNF550Q7Z398 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF550Q7Z398 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ZNF550Q7Z398 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF550Q7Z398 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms