Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf139Q6ZV77 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf139Q6ZV77 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf139Q6ZV77 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf139Q6ZV77 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf139Q6ZV77 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.61■□□□□ 0.57
C9orf139Q6ZV77 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
C9orf139Q6ZV77 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf139Q6ZV77 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.6■□□□□ 0.57
C9orf139Q6ZV77 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf139Q6ZV77 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
C9orf139Q6ZV77 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf139Q6ZV77 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
C9orf139Q6ZV77 UNC93B3-201ENST00000308076 687 ntBASIC18.6■□□□□ 0.57
C9orf139Q6ZV77 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.6■□□□□ 0.57
C9orf139Q6ZV77 PBX2P1-201ENST00000493219 1291 ntBASIC18.6■□□□□ 0.57
C9orf139Q6ZV77 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.6■□□□□ 0.57
C9orf139Q6ZV77 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.6■□□□□ 0.57
C9orf139Q6ZV77 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf139Q6ZV77 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
C9orf139Q6ZV77 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.59■□□□□ 0.57
C9orf139Q6ZV77 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
C9orf139Q6ZV77 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.59■□□□□ 0.57
C9orf139Q6ZV77 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
C9orf139Q6ZV77 DUX4L19-201ENST00000557448 1267 ntBASIC18.59■□□□□ 0.57
C9orf139Q6ZV77 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.59■□□□□ 0.57
C9orf139Q6ZV77 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf139Q6ZV77 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf139Q6ZV77 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.58■□□□□ 0.56
C9orf139Q6ZV77 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
C9orf139Q6ZV77 AL136162.1-201ENST00000607711 1078 ntBASIC18.58■□□□□ 0.56
C9orf139Q6ZV77 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
C9orf139Q6ZV77 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
C9orf139Q6ZV77 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
C9orf139Q6ZV77 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
C9orf139Q6ZV77 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
C9orf139Q6ZV77 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
C9orf139Q6ZV77 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
C9orf139Q6ZV77 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C9orf139Q6ZV77 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
C9orf139Q6ZV77 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.57■□□□□ 0.56
C9orf139Q6ZV77 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.57■□□□□ 0.56
C9orf139Q6ZV77 AL022069.1-201ENST00000568025 1636 ntBASIC18.57■□□□□ 0.56
C9orf139Q6ZV77 AC135279.3-201ENST00000610945 1311 ntBASIC18.57■□□□□ 0.56
C9orf139Q6ZV77 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.57■□□□□ 0.56
C9orf139Q6ZV77 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
C9orf139Q6ZV77 AC092171.4-201ENST00000609130 632 ntBASIC18.57■□□□□ 0.56
C9orf139Q6ZV77 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.57■□□□□ 0.56
C9orf139Q6ZV77 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.56■□□□□ 0.56
C9orf139Q6ZV77 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
C9orf139Q6ZV77 EDA-201ENST00000338901 1233 ntBASIC18.56■□□□□ 0.56
C9orf139Q6ZV77 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.56■□□□□ 0.56
C9orf139Q6ZV77 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.56■□□□□ 0.56
C9orf139Q6ZV77 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
C9orf139Q6ZV77 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.56■□□□□ 0.56
C9orf139Q6ZV77 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
C9orf139Q6ZV77 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
C9orf139Q6ZV77 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.55■□□□□ 0.56
C9orf139Q6ZV77 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf139Q6ZV77 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.55■□□□□ 0.56
C9orf139Q6ZV77 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.55■□□□□ 0.56
C9orf139Q6ZV77 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf139Q6ZV77 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.55■□□□□ 0.56
C9orf139Q6ZV77 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf139Q6ZV77 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.55■□□□□ 0.56
C9orf139Q6ZV77 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf139Q6ZV77 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.55■□□□□ 0.56
C9orf139Q6ZV77 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf139Q6ZV77 AL161729.1-201ENST00000604104 1402 ntBASIC18.55■□□□□ 0.56
C9orf139Q6ZV77 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.55■□□□□ 0.56
C9orf139Q6ZV77 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.55■□□□□ 0.56
C9orf139Q6ZV77 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf139Q6ZV77 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf139Q6ZV77 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf139Q6ZV77 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.54■□□□□ 0.56
C9orf139Q6ZV77 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf139Q6ZV77 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.54■□□□□ 0.56
C9orf139Q6ZV77 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf139Q6ZV77 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf139Q6ZV77 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.54■□□□□ 0.56
C9orf139Q6ZV77 AC142381.2-201ENST00000566120 298 ntBASIC18.54■□□□□ 0.56
C9orf139Q6ZV77 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.54■□□□□ 0.56
C9orf139Q6ZV77 AL031432.3-201ENST00000607698 485 ntBASIC18.54■□□□□ 0.56
C9orf139Q6ZV77 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.54■□□□□ 0.56
C9orf139Q6ZV77 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
C9orf139Q6ZV77 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
C9orf139Q6ZV77 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
C9orf139Q6ZV77 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf139Q6ZV77 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.53■□□□□ 0.56
C9orf139Q6ZV77 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.53■□□□□ 0.56
C9orf139Q6ZV77 SUDS3P1-201ENST00000505831 966 ntBASIC18.53■□□□□ 0.56
C9orf139Q6ZV77 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
C9orf139Q6ZV77 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.53■□□□□ 0.56
C9orf139Q6ZV77 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.53■□□□□ 0.56
C9orf139Q6ZV77 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C9orf139Q6ZV77 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C9orf139Q6ZV77 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C9orf139Q6ZV77 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.52■□□□□ 0.56
C9orf139Q6ZV77 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
C9orf139Q6ZV77 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms