Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.43■■□□□ 1.02
RTL4Q6ZR62 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTL4Q6ZR62 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTL4Q6ZR62 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTL4Q6ZR62 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.42■■□□□ 1.02
RTL4Q6ZR62 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
RTL4Q6ZR62 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.42■■□□□ 1.02
RTL4Q6ZR62 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTL4Q6ZR62 AC092028.1-203ENST00000608262 953 ntBASIC21.42■■□□□ 1.02
RTL4Q6ZR62 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTL4Q6ZR62 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RTL4Q6ZR62 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.41■■□□□ 1.02
RTL4Q6ZR62 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTL4Q6ZR62 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTL4Q6ZR62 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.41■■□□□ 1.02
RTL4Q6ZR62 AF131216.4-201ENST00000638924 1588 ntBASIC21.41■■□□□ 1.02
RTL4Q6ZR62 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RTL4Q6ZR62 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTL4Q6ZR62 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.41■■□□□ 1.02
RTL4Q6ZR62 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.41■■□□□ 1.02
RTL4Q6ZR62 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.41■■□□□ 1.02
RTL4Q6ZR62 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.41■■□□□ 1.02
RTL4Q6ZR62 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.41■■□□□ 1.02
RTL4Q6ZR62 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RTL4Q6ZR62 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
RTL4Q6ZR62 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL4Q6ZR62 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL4Q6ZR62 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL4Q6ZR62 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.4■■□□□ 1.02
RTL4Q6ZR62 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
RTL4Q6ZR62 TSPY9P-201ENST00000440215 945 ntBASIC21.4■■□□□ 1.02
RTL4Q6ZR62 TSPY11P-201ENST00000442607 1045 ntBASIC21.4■■□□□ 1.02
RTL4Q6ZR62 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL4Q6ZR62 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL4Q6ZR62 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL4Q6ZR62 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RTL4Q6ZR62 UNC93B8-201ENST00000511903 705 ntBASIC21.39■■□□□ 1.01
RTL4Q6ZR62 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
RTL4Q6ZR62 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTL4Q6ZR62 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTL4Q6ZR62 KRT16P3-201ENST00000439127 1283 ntBASIC21.38■■□□□ 1.01
RTL4Q6ZR62 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.38■■□□□ 1.01
RTL4Q6ZR62 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTL4Q6ZR62 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RTL4Q6ZR62 LINC01124-201ENST00000409786 2117 ntBASIC21.38■■□□□ 1.01
RTL4Q6ZR62 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
RTL4Q6ZR62 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.38■■□□□ 1.01
RTL4Q6ZR62 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RTL4Q6ZR62 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.37■■□□□ 1.01
RTL4Q6ZR62 AC131212.1-201ENST00000613771 668 ntBASIC21.37■■□□□ 1.01
RTL4Q6ZR62 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RTL4Q6ZR62 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.37■■□□□ 1.01
RTL4Q6ZR62 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTL4Q6ZR62 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.37■■□□□ 1.01
RTL4Q6ZR62 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTL4Q6ZR62 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
RTL4Q6ZR62 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTL4Q6ZR62 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTL4Q6ZR62 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.36■■□□□ 1.01
RTL4Q6ZR62 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTL4Q6ZR62 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.36■■□□□ 1.01
RTL4Q6ZR62 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTL4Q6ZR62 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTL4Q6ZR62 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTL4Q6ZR62 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RTL4Q6ZR62 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.35■■□□□ 1.01
RTL4Q6ZR62 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTL4Q6ZR62 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTL4Q6ZR62 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RTL4Q6ZR62 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.35■■□□□ 1.01
RTL4Q6ZR62 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.35■■□□□ 1.01
RTL4Q6ZR62 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTL4Q6ZR62 MIR6089-201ENST00000616698 64 ntBASIC21.35■■□□□ 1.01
RTL4Q6ZR62 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTL4Q6ZR62 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.35■■□□□ 1.01
RTL4Q6ZR62 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTL4Q6ZR62 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTL4Q6ZR62 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTL4Q6ZR62 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTL4Q6ZR62 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
RTL4Q6ZR62 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTL4Q6ZR62 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL4Q6ZR62 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTL4Q6ZR62 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
RTL4Q6ZR62 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.34■■□□□ 1.01
RTL4Q6ZR62 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL4Q6ZR62 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.34■■□□□ 1.01
RTL4Q6ZR62 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.34■■□□□ 1.01
RTL4Q6ZR62 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTL4Q6ZR62 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTL4Q6ZR62 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL4Q6ZR62 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL4Q6ZR62 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL4Q6ZR62 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RTL4Q6ZR62 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RTL4Q6ZR62 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.33■■□□□ 1.01
RTL4Q6ZR62 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.33■■□□□ 1.01
RTL4Q6ZR62 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTL4Q6ZR62 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.33■■□□□ 1.01
RTL4Q6ZR62 MTDHP2-201ENST00000601468 714 ntBASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms