Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RAB11AP62491 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB11AP62491 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB11AP62491 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAB11AP62491 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RAB11AP62491 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB11AP62491 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB11AP62491 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAB11AP62491 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB11AP62491 KRT18P10-201ENST00000388836 1287 ntBASIC18.56■□□□□ 0.56
RAB11AP62491 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB11AP62491 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RAB11AP62491 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB11AP62491 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
RAB11AP62491 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB11AP62491 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB11AP62491 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB11AP62491 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RAB11AP62491 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB11AP62491 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB11AP62491 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.55■□□□□ 0.56
RAB11AP62491 AC060814.1-201ENST00000554326 538 ntBASIC18.55■□□□□ 0.56
RAB11AP62491 AC016575.1-201ENST00000607026 382 ntBASIC18.55■□□□□ 0.56
RAB11AP62491 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB11AP62491 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.55■□□□□ 0.56
RAB11AP62491 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RAB11AP62491 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB11AP62491 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB11AP62491 HLA-L-211ENST00000482052 1765 ntBASIC18.55■□□□□ 0.56
RAB11AP62491 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB11AP62491 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB11AP62491 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAB11AP62491 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAB11AP62491 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB11AP62491 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB11AP62491 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB11AP62491 ABHD17AP4-201ENST00000411545 909 ntBASIC18.54■□□□□ 0.56
RAB11AP62491 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RAB11AP62491 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.54■□□□□ 0.56
RAB11AP62491 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB11AP62491 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11AP62491 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11AP62491 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.53■□□□□ 0.56
RAB11AP62491 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.53■□□□□ 0.56
RAB11AP62491 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11AP62491 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RAB11AP62491 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RAB11AP62491 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11AP62491 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11AP62491 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.53■□□□□ 0.56
RAB11AP62491 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11AP62491 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.53■□□□□ 0.56
RAB11AP62491 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11AP62491 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11AP62491 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11AP62491 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11AP62491 RP9P-202ENST00000450133 1212 ntBASIC18.52■□□□□ 0.56
RAB11AP62491 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.52■□□□□ 0.56
RAB11AP62491 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11AP62491 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
RAB11AP62491 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
RAB11AP62491 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB11AP62491 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RAB11AP62491 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.52■□□□□ 0.55
RAB11AP62491 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RAB11AP62491 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RAB11AP62491 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RAB11AP62491 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11AP62491 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RAB11AP62491 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11AP62491 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11AP62491 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11AP62491 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11AP62491 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11AP62491 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RAB11AP62491 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.51■□□□□ 0.55
RAB11AP62491 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RAB11AP62491 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11AP62491 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11AP62491 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11AP62491 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11AP62491 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11AP62491 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11AP62491 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
RAB11AP62491 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB11AP62491 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.5■□□□□ 0.55
RAB11AP62491 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB11AP62491 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RAB11AP62491 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB11AP62491 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
RAB11AP62491 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB11AP62491 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB11AP62491 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB11AP62491 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB11AP62491 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB11AP62491 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RAB11AP62491 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB11AP62491 ECEL1P2-201ENST00000461596 1295 ntBASIC18.49■□□□□ 0.55
RAB11AP62491 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB11AP62491 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms