Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.38■□□□□ 0.85
ASCL1P50553 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
ASCL1P50553 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
ASCL1P50553 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ASCL1P50553 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ASCL1P50553 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ASCL1P50553 PBX2P1-201ENST00000493219 1291 ntBASIC20.37■□□□□ 0.85
ASCL1P50553 AC106739.1-201ENST00000617035 715 ntBASIC20.37■□□□□ 0.85
ASCL1P50553 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ASCL1P50553 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.37■□□□□ 0.85
ASCL1P50553 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.37■□□□□ 0.85
ASCL1P50553 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.37■□□□□ 0.85
ASCL1P50553 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ASCL1P50553 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ASCL1P50553 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ASCL1P50553 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.36■□□□□ 0.85
ASCL1P50553 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ASCL1P50553 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.36■□□□□ 0.85
ASCL1P50553 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ASCL1P50553 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ASCL1P50553 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ASCL1P50553 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.35■□□□□ 0.85
ASCL1P50553 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ASCL1P50553 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ASCL1P50553 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.35■□□□□ 0.85
ASCL1P50553 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.35■□□□□ 0.85
ASCL1P50553 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.35■□□□□ 0.85
ASCL1P50553 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ASCL1P50553 AC092803.2-201ENST00000564287 1899 ntBASIC20.35■□□□□ 0.85
ASCL1P50553 AC005703.6-201ENST00000623265 1329 ntBASIC20.34■□□□□ 0.85
ASCL1P50553 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ASCL1P50553 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ASCL1P50553 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
ASCL1P50553 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.34■□□□□ 0.85
ASCL1P50553 UNC93B3-201ENST00000308076 687 ntBASIC20.33■□□□□ 0.85
ASCL1P50553 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ASCL1P50553 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ASCL1P50553 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ASCL1P50553 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.33■□□□□ 0.84
ASCL1P50553 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
ASCL1P50553 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ASCL1P50553 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.33■□□□□ 0.84
ASCL1P50553 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
ASCL1P50553 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ASCL1P50553 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ASCL1P50553 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
ASCL1P50553 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
ASCL1P50553 AC142381.2-201ENST00000566120 298 ntBASIC20.32■□□□□ 0.84
ASCL1P50553 AL136162.1-201ENST00000607711 1078 ntBASIC20.32■□□□□ 0.84
ASCL1P50553 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ASCL1P50553 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ASCL1P50553 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.32■□□□□ 0.84
ASCL1P50553 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.31■□□□□ 0.84
ASCL1P50553 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ASCL1P50553 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ASCL1P50553 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ASCL1P50553 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ASCL1P50553 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ASCL1P50553 AC135279.3-201ENST00000610945 1311 ntBASIC20.3■□□□□ 0.84
ASCL1P50553 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ASCL1P50553 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.3■□□□□ 0.84
ASCL1P50553 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.3■□□□□ 0.84
ASCL1P50553 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ASCL1P50553 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
ASCL1P50553 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.3■□□□□ 0.84
ASCL1P50553 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.3■□□□□ 0.84
ASCL1P50553 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.3■□□□□ 0.84
ASCL1P50553 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ASCL1P50553 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.29■□□□□ 0.84
ASCL1P50553 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ASCL1P50553 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ASCL1P50553 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ASCL1P50553 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ASCL1P50553 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ASCL1P50553 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.29■□□□□ 0.84
ASCL1P50553 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ASCL1P50553 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.29■□□□□ 0.84
ASCL1P50553 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ASCL1P50553 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ASCL1P50553 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ASCL1P50553 AC145676.1-201ENST00000514988 2004 ntBASIC20.29■□□□□ 0.84
ASCL1P50553 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ASCL1P50553 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ASCL1P50553 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ASCL1P50553 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ASCL1P50553 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ASCL1P50553 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ASCL1P50553 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ASCL1P50553 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ASCL1P50553 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.28■□□□□ 0.84
ASCL1P50553 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.28■□□□□ 0.84
ASCL1P50553 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ASCL1P50553 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ASCL1P50553 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ASCL1P50553 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ASCL1P50553 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ASCL1P50553 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ASCL1P50553 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ASCL1P50553 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ASCL1P50553 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms