Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GDNFP39905 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.92■□□□□ 0.78
GDNFP39905 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GDNFP39905 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
GDNFP39905 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.92■□□□□ 0.78
GDNFP39905 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GDNFP39905 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GDNFP39905 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GDNFP39905 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
GDNFP39905 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.91■□□□□ 0.78
GDNFP39905 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.91■□□□□ 0.78
GDNFP39905 MIR3960-201ENST00000583311 91 ntBASIC19.91■□□□□ 0.78
GDNFP39905 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.91■□□□□ 0.78
GDNFP39905 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.91■□□□□ 0.78
GDNFP39905 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
GDNFP39905 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
GDNFP39905 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
GDNFP39905 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GDNFP39905 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
GDNFP39905 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.91■□□□□ 0.78
GDNFP39905 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GDNFP39905 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GDNFP39905 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GDNFP39905 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GDNFP39905 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GDNFP39905 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.9■□□□□ 0.78
GDNFP39905 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GDNFP39905 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
GDNFP39905 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GDNFP39905 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.9■□□□□ 0.78
GDNFP39905 HSD17B1P1-201ENST00000590052 955 ntBASIC19.9■□□□□ 0.78
GDNFP39905 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
GDNFP39905 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GDNFP39905 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
GDNFP39905 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.89■□□□□ 0.78
GDNFP39905 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
GDNFP39905 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
GDNFP39905 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.89■□□□□ 0.77
GDNFP39905 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.89■□□□□ 0.77
GDNFP39905 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GDNFP39905 AC007029.1-201ENST00000604183 313 ntBASIC19.89■□□□□ 0.77
GDNFP39905 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GDNFP39905 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GDNFP39905 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GDNFP39905 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GDNFP39905 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GDNFP39905 RNF126P1-201ENST00000567452 1320 ntBASIC19.88■□□□□ 0.77
GDNFP39905 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GDNFP39905 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.88■□□□□ 0.77
GDNFP39905 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GDNFP39905 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GDNFP39905 HLA-L-211ENST00000482052 1765 ntBASIC19.88■□□□□ 0.77
GDNFP39905 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
GDNFP39905 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GDNFP39905 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GDNFP39905 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.87■□□□□ 0.77
GDNFP39905 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GDNFP39905 RP9P-202ENST00000450133 1212 ntBASIC19.87■□□□□ 0.77
GDNFP39905 AC093536.1-201ENST00000569153 554 ntBASIC19.87■□□□□ 0.77
GDNFP39905 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GDNFP39905 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GDNFP39905 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GDNFP39905 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
GDNFP39905 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
GDNFP39905 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GDNFP39905 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GDNFP39905 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GDNFP39905 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GDNFP39905 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GDNFP39905 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GDNFP39905 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GDNFP39905 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDNFP39905 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDNFP39905 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GDNFP39905 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
GDNFP39905 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
GDNFP39905 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GDNFP39905 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDNFP39905 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDNFP39905 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDNFP39905 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.85■□□□□ 0.77
GDNFP39905 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDNFP39905 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDNFP39905 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDNFP39905 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.84■□□□□ 0.77
GDNFP39905 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GDNFP39905 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GDNFP39905 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GDNFP39905 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GDNFP39905 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GDNFP39905 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GDNFP39905 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
GDNFP39905 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
GDNFP39905 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
GDNFP39905 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GDNFP39905 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GDNFP39905 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
GDNFP39905 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GDNFP39905 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
GDNFP39905 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms