Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SNCAP37840 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNCAP37840 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNCAP37840 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SNCAP37840 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNCAP37840 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNCAP37840 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.8■□□□□ 0.6
SNCAP37840 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SNCAP37840 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SNCAP37840 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNCAP37840 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNCAP37840 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SNCAP37840 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SNCAP37840 AC004812.2-201ENST00000611079 2094 ntBASIC18.79■□□□□ 0.6
SNCAP37840 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNCAP37840 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNCAP37840 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SNCAP37840 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.79■□□□□ 0.6
SNCAP37840 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SNCAP37840 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SNCAP37840 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.79■□□□□ 0.6
SNCAP37840 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNCAP37840 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
SNCAP37840 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNCAP37840 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNCAP37840 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNCAP37840 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNCAP37840 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SNCAP37840 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.78■□□□□ 0.6
SNCAP37840 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNCAP37840 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SNCAP37840 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.78■□□□□ 0.6
SNCAP37840 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNCAP37840 AC233723.2-201ENST00000623798 2106 ntBASIC18.77■□□□□ 0.6
SNCAP37840 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNCAP37840 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNCAP37840 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNCAP37840 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.77■□□□□ 0.6
SNCAP37840 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SNCAP37840 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNCAP37840 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNCAP37840 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNCAP37840 ECEL1P2-201ENST00000461596 1295 ntBASIC18.77■□□□□ 0.6
SNCAP37840 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SNCAP37840 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNCAP37840 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNCAP37840 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.77■□□□□ 0.6
SNCAP37840 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SNCAP37840 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNCAP37840 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNCAP37840 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNCAP37840 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNCAP37840 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNCAP37840 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.76■□□□□ 0.59
SNCAP37840 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNCAP37840 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.76■□□□□ 0.59
SNCAP37840 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNCAP37840 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SNCAP37840 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNCAP37840 AC092296.2-201ENST00000589470 999 ntBASIC18.76■□□□□ 0.59
SNCAP37840 AC022413.1-201ENST00000624602 984 ntBASIC18.76■□□□□ 0.59
SNCAP37840 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.76■□□□□ 0.59
SNCAP37840 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNCAP37840 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNCAP37840 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNCAP37840 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNCAP37840 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNCAP37840 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNCAP37840 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNCAP37840 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNCAP37840 MIR639-201ENST00000384974 98 ntBASIC18.75■□□□□ 0.59
SNCAP37840 RP9P-202ENST00000450133 1212 ntBASIC18.75■□□□□ 0.59
SNCAP37840 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.75■□□□□ 0.59
SNCAP37840 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNCAP37840 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNCAP37840 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNCAP37840 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SNCAP37840 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNCAP37840 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.74■□□□□ 0.59
SNCAP37840 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.74■□□□□ 0.59
SNCAP37840 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SNCAP37840 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNCAP37840 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNCAP37840 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNCAP37840 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.74■□□□□ 0.59
SNCAP37840 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNCAP37840 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNCAP37840 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.74■□□□□ 0.59
SNCAP37840 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.74■□□□□ 0.59
SNCAP37840 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNCAP37840 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.74■□□□□ 0.59
SNCAP37840 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNCAP37840 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNCAP37840 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNCAP37840 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.73■□□□□ 0.59
SNCAP37840 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNCAP37840 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.73■□□□□ 0.59
SNCAP37840 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.73■□□□□ 0.59
SNCAP37840 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNCAP37840 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms