Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.23■□□□□ 0.99
ABCD3P28288 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.23■□□□□ 0.99
ABCD3P28288 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.23■□□□□ 0.99
ABCD3P28288 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ABCD3P28288 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.23■□□□□ 0.99
ABCD3P28288 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ABCD3P28288 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ABCD3P28288 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ABCD3P28288 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ABCD3P28288 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.22■□□□□ 0.99
ABCD3P28288 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ABCD3P28288 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
ABCD3P28288 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.22■□□□□ 0.99
ABCD3P28288 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
ABCD3P28288 TSPY9P-201ENST00000440215 945 ntBASIC21.22■□□□□ 0.99
ABCD3P28288 TSPY11P-201ENST00000442607 1045 ntBASIC21.22■□□□□ 0.99
ABCD3P28288 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.22■□□□□ 0.99
ABCD3P28288 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ABCD3P28288 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ABCD3P28288 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ABCD3P28288 AL161729.1-201ENST00000604104 1402 ntBASIC21.21■□□□□ 0.99
ABCD3P28288 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ABCD3P28288 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
ABCD3P28288 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.21■□□□□ 0.99
ABCD3P28288 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ABCD3P28288 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ABCD3P28288 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ABCD3P28288 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ABCD3P28288 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ABCD3P28288 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ABCD3P28288 LINC00543-201ENST00000567234 1845 ntBASIC21.2■□□□□ 0.98
ABCD3P28288 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.2■□□□□ 0.98
ABCD3P28288 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ABCD3P28288 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ABCD3P28288 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.2■□□□□ 0.98
ABCD3P28288 UNC93B8-201ENST00000511903 705 ntBASIC21.2■□□□□ 0.98
ABCD3P28288 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ABCD3P28288 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
ABCD3P28288 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ABCD3P28288 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ABCD3P28288 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ABCD3P28288 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ABCD3P28288 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.19■□□□□ 0.98
ABCD3P28288 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.19■□□□□ 0.98
ABCD3P28288 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.19■□□□□ 0.98
ABCD3P28288 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.19■□□□□ 0.98
ABCD3P28288 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.19■□□□□ 0.98
ABCD3P28288 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ABCD3P28288 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.19■□□□□ 0.98
ABCD3P28288 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.19■□□□□ 0.98
ABCD3P28288 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.19■□□□□ 0.98
ABCD3P28288 AC141586.4-201ENST00000624558 1573 ntBASIC21.19■□□□□ 0.98
ABCD3P28288 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ABCD3P28288 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.18■□□□□ 0.98
ABCD3P28288 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ABCD3P28288 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ABCD3P28288 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.18■□□□□ 0.98
ABCD3P28288 MTDHP2-201ENST00000601468 714 ntBASIC21.18■□□□□ 0.98
ABCD3P28288 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.18■□□□□ 0.98
ABCD3P28288 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ABCD3P28288 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.17■□□□□ 0.98
ABCD3P28288 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.17■□□□□ 0.98
ABCD3P28288 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ABCD3P28288 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
ABCD3P28288 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ABCD3P28288 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ABCD3P28288 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ABCD3P28288 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.16■□□□□ 0.98
ABCD3P28288 AC010997.5-201ENST00000609182 354 ntBASIC21.16■□□□□ 0.98
ABCD3P28288 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.16■□□□□ 0.98
ABCD3P28288 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ABCD3P28288 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ABCD3P28288 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCD3P28288 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCD3P28288 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.15■□□□□ 0.98
ABCD3P28288 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCD3P28288 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCD3P28288 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCD3P28288 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ABCD3P28288 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCD3P28288 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ABCD3P28288 MIR6722-201ENST00000617286 78 ntBASIC21.15■□□□□ 0.98
ABCD3P28288 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCD3P28288 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ABCD3P28288 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ABCD3P28288 KRT16P3-201ENST00000439127 1283 ntBASIC21.14■□□□□ 0.97
ABCD3P28288 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.14■□□□□ 0.97
ABCD3P28288 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ABCD3P28288 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ABCD3P28288 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.14■□□□□ 0.97
ABCD3P28288 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.14■□□□□ 0.97
ABCD3P28288 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
ABCD3P28288 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.14■□□□□ 0.97
ABCD3P28288 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.14■□□□□ 0.97
ABCD3P28288 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ABCD3P28288 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
ABCD3P28288 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
ABCD3P28288 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.13■□□□□ 0.97
ABCD3P28288 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ABCD3P28288 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms