Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.49■□□□□ 0.87
PPP3CBP16298 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.49■□□□□ 0.87
PPP3CBP16298 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.49■□□□□ 0.87
PPP3CBP16298 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.49■□□□□ 0.87
PPP3CBP16298 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PPP3CBP16298 AC008406.3-201ENST00000620001 1374 ntBASIC20.48■□□□□ 0.87
PPP3CBP16298 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CBP16298 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CBP16298 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.48■□□□□ 0.87
PPP3CBP16298 MTDHP2-201ENST00000601468 714 ntBASIC20.48■□□□□ 0.87
PPP3CBP16298 AC010997.5-201ENST00000609182 354 ntBASIC20.48■□□□□ 0.87
PPP3CBP16298 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.48■□□□□ 0.87
PPP3CBP16298 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CBP16298 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CBP16298 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CBP16298 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP3CBP16298 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP3CBP16298 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP3CBP16298 AC090877.2-201ENST00000558441 1738 ntBASIC20.47■□□□□ 0.87
PPP3CBP16298 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP3CBP16298 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP3CBP16298 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.47■□□□□ 0.87
PPP3CBP16298 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.47■□□□□ 0.87
PPP3CBP16298 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPP3CBP16298 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP3CBP16298 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
PPP3CBP16298 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.47■□□□□ 0.87
PPP3CBP16298 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PPP3CBP16298 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CBP16298 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.46■□□□□ 0.87
PPP3CBP16298 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PPP3CBP16298 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CBP16298 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CBP16298 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CBP16298 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.46■□□□□ 0.87
PPP3CBP16298 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.46■□□□□ 0.87
PPP3CBP16298 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PPP3CBP16298 AC096887.2-201ENST00000623443 1957 ntBASIC20.46■□□□□ 0.87
PPP3CBP16298 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CBP16298 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CBP16298 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CBP16298 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PPP3CBP16298 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.45■□□□□ 0.86
PPP3CBP16298 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP3CBP16298 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPP3CBP16298 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.45■□□□□ 0.86
PPP3CBP16298 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP3CBP16298 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP3CBP16298 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PPP3CBP16298 AC142381.3-201ENST00000568208 1670 ntBASIC20.45■□□□□ 0.86
PPP3CBP16298 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.44■□□□□ 0.86
PPP3CBP16298 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP3CBP16298 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP3CBP16298 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP3CBP16298 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP3CBP16298 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.43■□□□□ 0.86
PPP3CBP16298 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PPP3CBP16298 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
PPP3CBP16298 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.43■□□□□ 0.86
PPP3CBP16298 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.43■□□□□ 0.86
PPP3CBP16298 MIR6724-1-201ENST00000616420 92 ntBASIC20.43■□□□□ 0.86
PPP3CBP16298 MIR6724-2-201ENST00000616483 92 ntBASIC20.43■□□□□ 0.86
PPP3CBP16298 MIR6724-4-201ENST00000617390 92 ntBASIC20.43■□□□□ 0.86
PPP3CBP16298 MIR6724-3-201ENST00000622482 92 ntBASIC20.43■□□□□ 0.86
PPP3CBP16298 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
PPP3CBP16298 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.43■□□□□ 0.86
PPP3CBP16298 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP3CBP16298 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PPP3CBP16298 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.42■□□□□ 0.86
PPP3CBP16298 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP3CBP16298 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP3CBP16298 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PPP3CBP16298 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.42■□□□□ 0.86
PPP3CBP16298 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.42■□□□□ 0.86
PPP3CBP16298 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.42■□□□□ 0.86
PPP3CBP16298 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP3CBP16298 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.42■□□□□ 0.86
PPP3CBP16298 AF131216.4-201ENST00000638924 1588 ntBASIC20.42■□□□□ 0.86
PPP3CBP16298 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP3CBP16298 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PPP3CBP16298 AC068473.5-201ENST00000616428 2072 ntBASIC20.41■□□□□ 0.86
PPP3CBP16298 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.41■□□□□ 0.86
PPP3CBP16298 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.41■□□□□ 0.86
PPP3CBP16298 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPP3CBP16298 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPP3CBP16298 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPP3CBP16298 CLDN5-201ENST00000403084 2357 ntBASIC20.41■□□□□ 0.86
PPP3CBP16298 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP3CBP16298 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP3CBP16298 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PPP3CBP16298 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.4■□□□□ 0.86
PPP3CBP16298 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.4■□□□□ 0.86
PPP3CBP16298 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.4■□□□□ 0.86
PPP3CBP16298 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.4■□□□□ 0.86
PPP3CBP16298 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP3CBP16298 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.4■□□□□ 0.86
PPP3CBP16298 AL139125.2-201ENST00000623134 1869 ntBASIC20.39■□□□□ 0.86
PPP3CBP16298 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PPP3CBP16298 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PPP3CBP16298 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms