Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DEFA4P12838 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DEFA4P12838 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.55■□□□□ 0.56
DEFA4P12838 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.55■□□□□ 0.56
DEFA4P12838 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
DEFA4P12838 ABCB10P4-201ENST00000566803 2184 ntBASIC18.55■□□□□ 0.56
DEFA4P12838 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.55■□□□□ 0.56
DEFA4P12838 FOXO3B-201ENST00000395675 1928 ntBASIC18.55■□□□□ 0.56
DEFA4P12838 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
DEFA4P12838 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DEFA4P12838 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DEFA4P12838 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
DEFA4P12838 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DEFA4P12838 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DEFA4P12838 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DEFA4P12838 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DEFA4P12838 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.54■□□□□ 0.56
DEFA4P12838 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
DEFA4P12838 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
DEFA4P12838 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DEFA4P12838 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DEFA4P12838 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.53■□□□□ 0.56
DEFA4P12838 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.53■□□□□ 0.56
DEFA4P12838 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
DEFA4P12838 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
DEFA4P12838 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.53■□□□□ 0.56
DEFA4P12838 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DEFA4P12838 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.53■□□□□ 0.56
DEFA4P12838 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.53■□□□□ 0.56
DEFA4P12838 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
DEFA4P12838 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.53■□□□□ 0.56
DEFA4P12838 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.53■□□□□ 0.56
DEFA4P12838 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DEFA4P12838 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.53■□□□□ 0.56
DEFA4P12838 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
DEFA4P12838 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
DEFA4P12838 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
DEFA4P12838 DUSP8P5-201ENST00000422884 1815 ntBASIC18.52■□□□□ 0.56
DEFA4P12838 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
DEFA4P12838 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DEFA4P12838 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
DEFA4P12838 MIR6765-201ENST00000614092 87 ntBASIC18.52■□□□□ 0.56
DEFA4P12838 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DEFA4P12838 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DEFA4P12838 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DEFA4P12838 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.52■□□□□ 0.55
DEFA4P12838 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.51■□□□□ 0.55
DEFA4P12838 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DEFA4P12838 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DEFA4P12838 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DEFA4P12838 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DEFA4P12838 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DEFA4P12838 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DEFA4P12838 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.5■□□□□ 0.55
DEFA4P12838 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DEFA4P12838 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DEFA4P12838 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DEFA4P12838 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DEFA4P12838 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DEFA4P12838 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DEFA4P12838 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DEFA4P12838 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DEFA4P12838 RPS2P7-201ENST00000447334 885 ntBASIC18.49■□□□□ 0.55
DEFA4P12838 U85056.1-201ENST00000616429 682 ntBASIC18.49■□□□□ 0.55
DEFA4P12838 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DEFA4P12838 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
DEFA4P12838 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
DEFA4P12838 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DEFA4P12838 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DEFA4P12838 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DEFA4P12838 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DEFA4P12838 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.49■□□□□ 0.55
DEFA4P12838 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DEFA4P12838 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DEFA4P12838 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DEFA4P12838 DUX4L9-201ENST00000449051 1259 ntBASIC18.48■□□□□ 0.55
DEFA4P12838 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DEFA4P12838 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
DEFA4P12838 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DEFA4P12838 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.48■□□□□ 0.55
DEFA4P12838 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.48■□□□□ 0.55
DEFA4P12838 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DEFA4P12838 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DEFA4P12838 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DEFA4P12838 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.47■□□□□ 0.55
DEFA4P12838 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DEFA4P12838 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DEFA4P12838 ABHD17AP5-201ENST00000580133 923 ntBASIC18.47■□□□□ 0.55
DEFA4P12838 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.47■□□□□ 0.55
DEFA4P12838 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
DEFA4P12838 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DEFA4P12838 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DEFA4P12838 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.47■□□□□ 0.55
DEFA4P12838 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
DEFA4P12838 AC079834.2-201ENST00000609776 1949 ntBASIC18.47■□□□□ 0.55
DEFA4P12838 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DEFA4P12838 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.46■□□□□ 0.55
DEFA4P12838 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.46■□□□□ 0.55
DEFA4P12838 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DEFA4P12838 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms