Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.95■□□□□ 0.94
BMP4P12644 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BMP4P12644 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BMP4P12644 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
BMP4P12644 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BMP4P12644 AL359504.2-201ENST00000605506 1601 ntBASIC20.95■□□□□ 0.94
BMP4P12644 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
BMP4P12644 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP4P12644 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP4P12644 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP4P12644 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.94■□□□□ 0.94
BMP4P12644 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BMP4P12644 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP4P12644 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP4P12644 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.93■□□□□ 0.94
BMP4P12644 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.93■□□□□ 0.94
BMP4P12644 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BMP4P12644 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BMP4P12644 MIR6765-201ENST00000614092 87 ntBASIC20.93■□□□□ 0.94
BMP4P12644 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
BMP4P12644 AC233723.2-201ENST00000623798 2106 ntBASIC20.93■□□□□ 0.94
BMP4P12644 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
BMP4P12644 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.93■□□□□ 0.94
BMP4P12644 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
BMP4P12644 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BMP4P12644 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BMP4P12644 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BMP4P12644 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BMP4P12644 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BMP4P12644 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.92■□□□□ 0.94
BMP4P12644 AC139795.1-202ENST00000500444 432 ntBASIC20.92■□□□□ 0.94
BMP4P12644 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.92■□□□□ 0.94
BMP4P12644 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BMP4P12644 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BMP4P12644 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BMP4P12644 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BMP4P12644 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BMP4P12644 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BMP4P12644 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BMP4P12644 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
BMP4P12644 DUX4L9-201ENST00000449051 1259 ntBASIC20.91■□□□□ 0.94
BMP4P12644 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BMP4P12644 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
BMP4P12644 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP4P12644 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP4P12644 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.9■□□□□ 0.94
BMP4P12644 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP4P12644 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.9■□□□□ 0.94
BMP4P12644 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP4P12644 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP4P12644 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
BMP4P12644 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BMP4P12644 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
BMP4P12644 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
BMP4P12644 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
BMP4P12644 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.94
BMP4P12644 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
BMP4P12644 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BMP4P12644 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BMP4P12644 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.89■□□□□ 0.93
BMP4P12644 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BMP4P12644 C1orf229-201ENST00000623686 2258 ntBASIC20.89■□□□□ 0.93
BMP4P12644 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BMP4P12644 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BMP4P12644 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BMP4P12644 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
BMP4P12644 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.88■□□□□ 0.93
BMP4P12644 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.88■□□□□ 0.93
BMP4P12644 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BMP4P12644 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.88■□□□□ 0.93
BMP4P12644 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BMP4P12644 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.87■□□□□ 0.93
BMP4P12644 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BMP4P12644 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.87■□□□□ 0.93
BMP4P12644 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
BMP4P12644 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BMP4P12644 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BMP4P12644 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BMP4P12644 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.87■□□□□ 0.93
BMP4P12644 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BMP4P12644 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BMP4P12644 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
BMP4P12644 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BMP4P12644 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.86■□□□□ 0.93
BMP4P12644 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BMP4P12644 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.86■□□□□ 0.93
BMP4P12644 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.86■□□□□ 0.93
BMP4P12644 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BMP4P12644 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.86■□□□□ 0.93
BMP4P12644 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BMP4P12644 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BMP4P12644 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.86■□□□□ 0.93
BMP4P12644 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.86■□□□□ 0.93
BMP4P12644 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
BMP4P12644 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BMP4P12644 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.85■□□□□ 0.93
BMP4P12644 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BMP4P12644 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BMP4P12644 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BMP4P12644 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms