Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CGB3P0DN86 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CGB3P0DN86 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.95■□□□□ 0.62
CGB3P0DN86 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.95■□□□□ 0.62
CGB3P0DN86 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CGB3P0DN86 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.95■□□□□ 0.62
CGB3P0DN86 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CGB3P0DN86 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.94■□□□□ 0.62
CGB3P0DN86 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGB3P0DN86 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGB3P0DN86 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGB3P0DN86 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.94■□□□□ 0.62
CGB3P0DN86 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CGB3P0DN86 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CGB3P0DN86 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGB3P0DN86 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CGB3P0DN86 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGB3P0DN86 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGB3P0DN86 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGB3P0DN86 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGB3P0DN86 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGB3P0DN86 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CGB3P0DN86 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.93■□□□□ 0.62
CGB3P0DN86 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CGB3P0DN86 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.93■□□□□ 0.62
CGB3P0DN86 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CGB3P0DN86 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.93■□□□□ 0.62
CGB3P0DN86 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CGB3P0DN86 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CGB3P0DN86 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.92■□□□□ 0.62
CGB3P0DN86 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.92■□□□□ 0.62
CGB3P0DN86 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.92■□□□□ 0.62
CGB3P0DN86 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.92■□□□□ 0.62
CGB3P0DN86 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CGB3P0DN86 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.92■□□□□ 0.62
CGB3P0DN86 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CGB3P0DN86 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CGB3P0DN86 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CGB3P0DN86 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.91■□□□□ 0.62
CGB3P0DN86 AC137630.3-201ENST00000607245 391 ntBASIC18.91■□□□□ 0.62
CGB3P0DN86 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
CGB3P0DN86 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.91■□□□□ 0.62
CGB3P0DN86 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CGB3P0DN86 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CGB3P0DN86 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CGB3P0DN86 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CGB3P0DN86 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CGB3P0DN86 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CGB3P0DN86 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CGB3P0DN86 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CGB3P0DN86 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.9■□□□□ 0.62
CGB3P0DN86 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.9■□□□□ 0.62
CGB3P0DN86 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.9■□□□□ 0.62
CGB3P0DN86 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.9■□□□□ 0.62
CGB3P0DN86 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CGB3P0DN86 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CGB3P0DN86 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CGB3P0DN86 AL031848.2-201ENST00000607670 837 ntBASIC18.89■□□□□ 0.61
CGB3P0DN86 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.89■□□□□ 0.61
CGB3P0DN86 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.89■□□□□ 0.61
CGB3P0DN86 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CGB3P0DN86 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CGB3P0DN86 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.88■□□□□ 0.61
CGB3P0DN86 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CGB3P0DN86 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CGB3P0DN86 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CGB3P0DN86 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CGB3P0DN86 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.88■□□□□ 0.61
CGB3P0DN86 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.88■□□□□ 0.61
CGB3P0DN86 AC004448.1-201ENST00000458332 883 ntBASIC18.88■□□□□ 0.61
CGB3P0DN86 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.88■□□□□ 0.61
CGB3P0DN86 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CGB3P0DN86 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CGB3P0DN86 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CGB3P0DN86 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.87■□□□□ 0.61
CGB3P0DN86 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CGB3P0DN86 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CGB3P0DN86 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CGB3P0DN86 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.87■□□□□ 0.61
CGB3P0DN86 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CGB3P0DN86 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CGB3P0DN86 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CGB3P0DN86 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CGB3P0DN86 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CGB3P0DN86 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CGB3P0DN86 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CGB3P0DN86 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CGB3P0DN86 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CGB3P0DN86 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CGB3P0DN86 ALDH1A3-203ENST00000557963 1670 ntBASIC18.86■□□□□ 0.61
CGB3P0DN86 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CGB3P0DN86 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.86■□□□□ 0.61
CGB3P0DN86 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CGB3P0DN86 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CGB3P0DN86 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CGB3P0DN86 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CGB3P0DN86 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CGB3P0DN86 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CGB3P0DN86 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CGB3P0DN86 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms