Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LCATP04180 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LCATP04180 KRT8P33-201ENST00000508125 1423 ntBASIC20.02■□□□□ 0.8
LCATP04180 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.02■□□□□ 0.8
LCATP04180 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCATP04180 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.02■□□□□ 0.8
LCATP04180 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.02■□□□□ 0.8
LCATP04180 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCATP04180 KRT18P24-201ENST00000344739 1156 ntBASIC20.02■□□□□ 0.8
LCATP04180 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
LCATP04180 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCATP04180 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCATP04180 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LCATP04180 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
LCATP04180 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LCATP04180 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LCATP04180 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.01■□□□□ 0.79
LCATP04180 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
LCATP04180 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LCATP04180 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LCATP04180 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
LCATP04180 YBX1P4-201ENST00000392794 808 ntBASIC20.01■□□□□ 0.79
LCATP04180 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LCATP04180 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LCATP04180 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
LCATP04180 MIR4508-201ENST00000584178 70 ntBASIC20.01■□□□□ 0.79
LCATP04180 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.01■□□□□ 0.79
LCATP04180 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LCATP04180 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LCATP04180 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LCATP04180 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LCATP04180 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LCATP04180 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LCATP04180 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20■□□□□ 0.79
LCATP04180 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LCATP04180 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LCATP04180 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20■□□□□ 0.79
LCATP04180 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20■□□□□ 0.79
LCATP04180 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20■□□□□ 0.79
LCATP04180 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LCATP04180 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LCATP04180 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LCATP04180 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LCATP04180 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LCATP04180 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.99■□□□□ 0.79
LCATP04180 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.99■□□□□ 0.79
LCATP04180 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LCATP04180 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LCATP04180 AL022069.1-201ENST00000568025 1636 ntBASIC19.98■□□□□ 0.79
LCATP04180 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LCATP04180 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LCATP04180 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LCATP04180 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LCATP04180 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LCATP04180 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.98■□□□□ 0.79
LCATP04180 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LCATP04180 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LCATP04180 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.98■□□□□ 0.79
LCATP04180 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LCATP04180 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LCATP04180 AL161729.1-201ENST00000604104 1402 ntBASIC19.97■□□□□ 0.79
LCATP04180 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LCATP04180 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.97■□□□□ 0.79
LCATP04180 AC103834.1-201ENST00000520383 144 ntBASIC19.97■□□□□ 0.79
LCATP04180 MIR4281-201ENST00000580852 62 ntBASIC19.97■□□□□ 0.79
LCATP04180 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LCATP04180 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LCATP04180 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LCATP04180 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LCATP04180 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LCATP04180 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LCATP04180 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.96■□□□□ 0.79
LCATP04180 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LCATP04180 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LCATP04180 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LCATP04180 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LCATP04180 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LCATP04180 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LCATP04180 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.96■□□□□ 0.79
LCATP04180 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LCATP04180 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
LCATP04180 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
LCATP04180 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LCATP04180 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCATP04180 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.95■□□□□ 0.78
LCATP04180 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.95■□□□□ 0.78
LCATP04180 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LCATP04180 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.95■□□□□ 0.78
LCATP04180 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCATP04180 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.95■□□□□ 0.78
LCATP04180 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCATP04180 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LCATP04180 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.94■□□□□ 0.78
LCATP04180 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LCATP04180 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
LCATP04180 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LCATP04180 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.94■□□□□ 0.78
LCATP04180 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.94■□□□□ 0.78
LCATP04180 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.94■□□□□ 0.78
LCATP04180 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms