Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 AC004812.2-201ENST00000611079 2094 ntBASIC18.37■□□□□ 0.53
NDUFA3O95167 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFA3O95167 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
NDUFA3O95167 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFA3O95167 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NDUFA3O95167 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.36■□□□□ 0.53
NDUFA3O95167 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.36■□□□□ 0.53
NDUFA3O95167 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFA3O95167 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.36■□□□□ 0.53
NDUFA3O95167 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFA3O95167 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NDUFA3O95167 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFA3O95167 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFA3O95167 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFA3O95167 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFA3O95167 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NDUFA3O95167 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA3O95167 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA3O95167 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA3O95167 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
NDUFA3O95167 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
NDUFA3O95167 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA3O95167 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA3O95167 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.34■□□□□ 0.53
NDUFA3O95167 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDUFA3O95167 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
NDUFA3O95167 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.33■□□□□ 0.52
NDUFA3O95167 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFA3O95167 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFA3O95167 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NDUFA3O95167 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.33■□□□□ 0.52
NDUFA3O95167 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFA3O95167 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.33■□□□□ 0.52
NDUFA3O95167 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.33■□□□□ 0.52
NDUFA3O95167 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFA3O95167 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFA3O95167 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFA3O95167 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.32■□□□□ 0.52
NDUFA3O95167 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFA3O95167 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFA3O95167 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.32■□□□□ 0.52
NDUFA3O95167 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NDUFA3O95167 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NDUFA3O95167 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFA3O95167 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFA3O95167 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFA3O95167 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFA3O95167 BX664725.1-201ENST00000438252 379 ntBASIC18.31■□□□□ 0.52
NDUFA3O95167 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NDUFA3O95167 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFA3O95167 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFA3O95167 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFA3O95167 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFA3O95167 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFA3O95167 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFA3O95167 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.31■□□□□ 0.52
NDUFA3O95167 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.3■□□□□ 0.52
NDUFA3O95167 AC004448.1-201ENST00000458332 883 ntBASIC18.3■□□□□ 0.52
NDUFA3O95167 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.3■□□□□ 0.52
NDUFA3O95167 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.3■□□□□ 0.52
NDUFA3O95167 Z92544.1-202ENST00000571933 1220 ntBASIC18.3■□□□□ 0.52
NDUFA3O95167 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.3■□□□□ 0.52
NDUFA3O95167 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFA3O95167 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.3■□□□□ 0.52
NDUFA3O95167 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFA3O95167 AC021242.3-201ENST00000607598 1377 ntBASIC18.3■□□□□ 0.52
NDUFA3O95167 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA3O95167 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA3O95167 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA3O95167 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA3O95167 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA3O95167 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.29■□□□□ 0.52
NDUFA3O95167 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA3O95167 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.29■□□□□ 0.52
NDUFA3O95167 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA3O95167 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA3O95167 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NDUFA3O95167 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA3O95167 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.29■□□□□ 0.52
NDUFA3O95167 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.29■□□□□ 0.52
NDUFA3O95167 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.29■□□□□ 0.52
NDUFA3O95167 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.29■□□□□ 0.52
NDUFA3O95167 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NDUFA3O95167 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
NDUFA3O95167 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA3O95167 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA3O95167 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA3O95167 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NDUFA3O95167 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NDUFA3O95167 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA3O95167 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFA3O95167 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFA3O95167 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFA3O95167 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NDUFA3O95167 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFA3O95167 AL451085.2-201ENST00000605085 799 ntBASIC18.28■□□□□ 0.52
NDUFA3O95167 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.28■□□□□ 0.52
NDUFA3O95167 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFA3O95167 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NDUFA3O95167 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms